RNA–Protein interactions for RNA: ENST00000430559.5

TNFSF13B-202, Transcript of TNF superfamily member 13b, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene TNFSF13B, Length 2,614 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TNFSF13B-202ENST00000430559 C4orf33Q8N1A6 199 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 HEXIM2Q96MH2 286 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZNF518BQ9C0D4 1074 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 CCDC134Q9H6E4 229 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 SYNCQ9H7C4 482 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZNF408Q9H9D4 720 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 CDHR5Q9HBB8 845 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 TPX2Q9ULW0 747 aaKnown RBP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 WDR3Q9UNX4 943 aaKnown RBP eCLIP13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZSWIM8A7E2V4 1837 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 PLXNB2O15031 1838 aa13.11□□□□□ -0.31
TNFSF13B-202ENST00000430559 A0A1W2PPM1 405 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 PFKMP08237 780 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 CAV1Q03135 178 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 PDIA2Q13087 525 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 FAM133BQ5BKY9 247 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 GLRA4Q5JXX5 417 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 FAM102AQ5T9C2 384 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 CPT1BQ92523 772 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 NKD2Q969F2 451 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 TMEM176AQ96HP8 235 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 HPDLQ96IR7 371 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZMAT2Q96NC0 199 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 CEP83Q9Y592 693 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 MYO18AQ92614 2054 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 HTTP42858 3142 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 EXOC1LA0A1B0GW35 172 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 RASA4BC9J798 803 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 E5RJQ4 531 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 RASA4O43374 803 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 TSPAN1O60635 241 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 GABBR2O75899 941 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 TFE3P19532 575 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 RPL22P35268 128 aaKnown RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 CTCFP49711 727 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 SURF1Q15526 300 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 KIZQ2M2Z5 673 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 DRICH1Q6PGQ1 229 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 CCDC33Q8N5R6 958 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 FAM71DQ8N9W8 422 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 NLRP7Q8WX94 980 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 CALN1Q9BXU9 219 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 KATNBL1Q9H079 304 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 LHX5Q9H2C1 402 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 VPS37BQ9H9H4 285 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 SLC40A1Q9NP59 571 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 FAM49BQ9NUQ9 324 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 PRMT7Q9NVM4 692 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 FAM120AQ9NZB2 1118 aaKnown RBP eCLIP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 LGALS13Q9UHV8 139 aa13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 FARP1Q9Y4F1 1045 aaPredicted RBP13.1□□□□□ -0.31
TNFSF13B-202ENST00000430559 CCT8L1PA6NM43 557 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 SNX3O60493 162 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 OAS1P00973 400 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 FGFR1P11362 822 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 GCLCP48506 637 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 FAM47EQ6ZV65 393 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 FAM183BPQ6ZVS7 135 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZC3H18Q86VM9 953 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 IGDCC3Q8IVU1 814 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 LENG1Q96BZ8 264 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 TSPAN16Q9UKR8 245 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZNF638Q14966 1978 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 CDH16O75309 829 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 TCEA3O75764 348 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 SNAI1O95863 264 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 ITGAVP06756 1048 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 PHKA2P46019 1235 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 ATP11AP98196 1134 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 MGAT5Q09328 741 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZNF792Q3KQV3 632 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 RELL1Q8IUW5 271 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 ANKLE1Q8NAG6 615 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 CKAP2Q8WWK9 683 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 CFAP57Q96MR6 1250 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 PAIP2Q9BPZ3 127 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 MRPL45Q9BRJ2 306 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 B3GNT5Q9BYG0 378 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 USP18Q9UMW8 372 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 RASSF9O75901 435 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 IL18RAPO95256 599 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 OSBPP22059 807 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 PTPN7P35236 360 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 ATXN1P54253 815 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 MYO1EQ12965 1108 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 TMEM132DQ14C87 1099 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 ZC3H12AQ5D1E8 599 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 MTHFD1LQ6UB35 978 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 TRABD2AQ86V40 505 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 RFX6Q8HWS3 928 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 C18orf25Q96B23 403 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 MCRS1Q96EZ8 462 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 RMDN2Q96LZ7 410 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 STMN4Q9H169 189 aaPredicted RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 MROH8Q9H579 483 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 PCDH9Q9HC56 1237 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 SLCO1B3Q9NPD5 702 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 TUBGCP4Q9UGJ1 667 aa13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 DRG1Q9Y295 367 aaKnown RBP13.09□□□□□ -0.31
TNFSF13B-202ENST00000430559 LAMA3Q16787 3333 aa13.08□□□□□ -0.32
Retrieved 100 of 20,778 RNA–protein pairs in 17.2 ms