RNA–Protein interactions for RNA: ENST00000430328.6

RIF1-204, Transcript of replication timing regulatory factor 1, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene RIF1, Length 7,992 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RIF1-204ENST00000430328 MYL3P08590 195 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 CALB2P22676 271 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 DSG3P32926 999 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 UBE3CQ15386 1083 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 KYAT1Q16773 422 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 LRRC6Q86X45 466 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 NSUN7Q8NE18 718 aaKnown RBP17.05■□□□□ 0.32
RIF1-204ENST00000430328 SETD9Q8NE22 299 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 LSM7Q9UK45 103 aaKnown RBP17.05■□□□□ 0.32
RIF1-204ENST00000430328 E2F8A0AVK6 867 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 RASA1P20936 1047 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 SLC16A2P36021 539 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 LRRC17Q8N6Y2 441 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 KCTD14Q9BQ13 255 aaPredicted RBP17.05■□□□□ 0.32
RIF1-204ENST00000430328 DCUN1D5Q9BTE7 237 aa17.05■□□□□ 0.32
RIF1-204ENST00000430328 C18orf8Q96DM3 657 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 FAM217BQ9NTX9 383 aaPredicted RBP17.04■□□□□ 0.32
RIF1-204ENST00000430328 PAK5Q9P286 719 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 CC2D2AQ9P2K1 1620 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 NEURL1BA8MQ27 555 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 LSM1O15116 133 aaKnown RBP17.04■□□□□ 0.32
RIF1-204ENST00000430328 APOC1P02654 83 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 IFNGR2P38484 337 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 STAT3P40763 770 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 BST2Q10589 180 aaKnown RBP17.04■□□□□ 0.32
RIF1-204ENST00000430328 C14orf93Q9H972 538 aaKnown RBP17.04■□□□□ 0.32
RIF1-204ENST00000430328 FBXO28Q9NVF7 368 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 TRMT6Q9UJA5 497 aaKnown RBP17.04■□□□□ 0.32
RIF1-204ENST00000430328 PALB2Q86YC2 1186 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 SLC9A6Q92581 669 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 CCSER1Q9C0I3 900 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 EHD3Q9NZN3 535 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 STOML2Q9UJZ1 356 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 ASAP1Q9ULH1 1129 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 CPB1P15086 417 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 KPNA1P52294 538 aaPredicted RBP17.04■□□□□ 0.32
RIF1-204ENST00000430328 USF2Q15853 346 aaPredicted RBP17.04■□□□□ 0.32
RIF1-204ENST00000430328 ATG14Q6ZNE5 492 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 TRPC4Q9UBN4 977 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 TCF4P15884 667 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 GRK4P32298 578 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 HK2P52789 917 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 VAC14Q08AM6 782 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 ARID3BQ8IVW6 561 aaPredicted RBP17.04■□□□□ 0.32
RIF1-204ENST00000430328 CCDC28BQ9BUN5 200 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 RACGAP1Q9H0H5 632 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 IZUMO2Q6UXV1 221 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 C4orf22Q6V702 233 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 SENP7Q9BQF6 1050 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 INSRP06213 1382 aa17.04■□□□□ 0.32
RIF1-204ENST00000430328 BMP10O95393 424 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 GRK3P35626 688 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 TCAIMQ8N3R3 496 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 CLHC1Q8NHS4 586 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 HEY2Q9UBP5 337 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 SNX12Q9UMY4 172 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 SKAP2O75563 359 aaPredicted RBP17.03■□□□□ 0.32
RIF1-204ENST00000430328 BNC1Q01954 994 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 MTMR1Q13613 665 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 TAF13Q15543 124 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 PIGSQ96S52 555 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 HAO1Q9UJM8 370 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 TRPM2O94759 1503 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 PRCPP42785 496 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 DNAJC3Q13217 504 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 NFYCQ13952 458 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 SWI5Q1ZZU3 235 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 ATP6AP1LQ52LC2 224 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 CLEC4GQ6UXB4 293 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 PABPC5Q96DU9 382 aaKnown RBP17.03■□□□□ 0.32
RIF1-204ENST00000430328 MED15Q96RN5 788 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 PCDHB6Q9Y5E3 794 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 PARD3Q8TEW0 1356 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 TM9SF1O15321 606 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 ZNF846Q147U1 533 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 PCNX4Q63HM2 1172 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 DENND1BQ6P3S1 775 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 MGRN1O60291 552 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 ENO2P09104 434 aaPredicted RBP17.03■□□□□ 0.32
RIF1-204ENST00000430328 ERICH5Q6P6B1 374 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 SPATA18Q8TC71 538 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 LINC00523Q86TU6 105 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 NEK6Q9HC98 313 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 DSEQ9UL01 958 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 PNMA3Q9UL41 463 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 MYRFQ9Y2G1 1151 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 H3BN98 237 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 PRPF3O43395 683 aaKnown RBP17.03■□□□□ 0.32
RIF1-204ENST00000430328 CAMK2GQ13555 558 aaPredicted RBP17.03■□□□□ 0.32
RIF1-204ENST00000430328 MPP2Q14168 576 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 DOK7Q18PE1 504 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 CLVS1Q8IUQ0 354 aaPredicted RBP17.03■□□□□ 0.32
RIF1-204ENST00000430328 PNKPQ96T60 521 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 EMC3Q9P0I2 261 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 SLC39A10Q9ULF5 831 aa17.03■□□□□ 0.32
RIF1-204ENST00000430328 ARL3P36405 182 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 CACNB2Q08289 660 aaPredicted RBP17.02■□□□□ 0.32
RIF1-204ENST00000430328 QPRTQ15274 297 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 SEL1L3Q68CR1 1132 aa17.02■□□□□ 0.32
RIF1-204ENST00000430328 FAM160B2Q86V87 743 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 33.1 ms