RNA–Protein interactions for RNA: ENST00000429544.6

MBD4-203, Transcript of methyl-CpG binding domain 4, DNA glycosylase, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene MBD4, Length 2,478 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MBD4-203ENST00000429544 MIPP30301 263 aa17.06■□□□□ 0.32
MBD4-203ENST00000429544 ARSEP51690 589 aa17.06■□□□□ 0.32
MBD4-203ENST00000429544 PLCB3Q01970 1234 aa17.06■□□□□ 0.32
MBD4-203ENST00000429544 OASLQ15646 514 aaKnown RBP17.06■□□□□ 0.32
MBD4-203ENST00000429544 CCL14Q16627 93 aa17.06■□□□□ 0.32
MBD4-203ENST00000429544 FAM183BPQ6ZVS7 135 aa17.06■□□□□ 0.32
MBD4-203ENST00000429544 TTC39CQ8N584 583 aa17.06■□□□□ 0.32
MBD4-203ENST00000429544 MYCBPAPQ8TBZ2 947 aa17.06■□□□□ 0.32
MBD4-203ENST00000429544 ZNF473Q8WTR7 871 aaKnown RBP17.06■□□□□ 0.32
MBD4-203ENST00000429544 MBLAC1A4D2B0 266 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 E5RJQ4 531 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 IGF2BP3O00425 579 aaKnown RBP eCLIP17.05■□□□□ 0.32
MBD4-203ENST00000429544 DNALI1O14645 258 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 RECQL4O94761 1208 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 PFKMP08237 780 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 CD48P09326 243 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 ZNF865P0CJ78 1059 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 RGS7P49802 495 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 CDR1P51861 262 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 TAF5Q15542 800 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 ACOT1Q86TX2 421 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 BEST2Q8NFU1 509 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 CCHCR1Q8TD31 782 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 HSPH1Q92598 858 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 PIWIL1Q96J94 861 aaKnown RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 CCT8L2Q96SF2 557 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 TMEM121Q9BTD3 319 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 TRIM6Q9C030 488 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 ADAM7Q9H2U9 754 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 SAE1Q9UBE0 346 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 KIAA1257Q9ULG3 409 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 DRG1Q9Y295 367 aaKnown RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 SRRM3A6NNA2 597 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 SGK1O00141 431 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 RNF8O76064 485 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 MYL3P08590 195 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 PSEN2P49810 448 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 HUNKP57058 714 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 CDC42EP1Q00587 391 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 GPS1Q13098 491 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 PPP1R26Q5T8A7 1209 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 ROPN1BQ9BZX4 212 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 ROPN1Q9HAT0 212 aaPredicted RBP17.05■□□□□ 0.32
MBD4-203ENST00000429544 FAM49BQ9NUQ9 324 aa17.05■□□□□ 0.32
MBD4-203ENST00000429544 ANKRD65E5RJM6 399 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 CST8O60676 142 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 AKAP5P24588 427 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 ZNF200P98182 395 aaPredicted RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 BEX3Q00994 111 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 OTUD4Q01804 1114 aaKnown RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 CCDC38Q502W7 563 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 CST9Q5W186 159 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 TRNP1Q6NT89 227 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 KCTD6Q8NC69 237 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 NKD2Q969F2 451 aaPredicted RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 STMN4Q9H169 189 aaPredicted RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 ASNSD1Q9NWL6 643 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 PIN4Q9Y237 131 aaKnown RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 NME7Q9Y5B8 376 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 TULP2O00295 520 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 GRAP2O75791 330 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 TRUB2O95900 331 aaKnown RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 ITGAVP06756 1048 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 GPD1P21695 349 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 MMP13P45452 471 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 TAF1CQ15572 869 aaPredicted RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 ZBTB6Q15916 424 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 SH3PXD2AQ5TCZ1 1133 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 MFSD5Q6N075 450 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 RFX6Q8HWS3 928 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 ZCCHC9Q8N567 271 aaKnown RBP17.04■□□□□ 0.32
MBD4-203ENST00000429544 SLC35B2Q8TB61 432 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 ACTL9Q8TC94 416 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 TMEM40Q8WWA1 233 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 C9orf72Q96LT7 481 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 PEBP4Q96S96 227 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 C10orf88Q9H8K7 445 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 GJD2Q9UKL4 321 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 USP18Q9UMW8 372 aa17.04■□□□□ 0.32
MBD4-203ENST00000429544 GMNCA6NCL1 334 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 TREHO43280 583 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 TRAPPC3O43617 180 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 FAM107AO95990 144 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 IFNB1P01574 187 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 CHN1P15882 459 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 CYP2B6P20813 491 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 ZNF143P52747 638 aaPredicted RBP17.03■□□□□ 0.32
MBD4-203ENST00000429544 RAB6CQ53S08 254 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 BBS12Q6ZW61 710 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 RXFP2Q8WXD0 754 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 RAB6CQ9H0N0 254 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 KLK14Q9P0G3 267 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 CNTN3Q9P232 1028 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 EFR3BQ9Y2G0 817 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 ACAP1Q15027 740 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 SNX17Q15036 470 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 STILQ15468 1287 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 TAZQ16635 292 aa17.03■□□□□ 0.32
MBD4-203ENST00000429544 C15orf59Q2T9L4 293 aaPredicted RBP17.03■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 16.6 ms