RNA–Protein interactions for RNA: ENST00000429416.7

SMARCA4-203, Transcript of SWI/SNF related, matrix associated, actin dependent regulator of chromatin, subfamily a, member 4, humanhuman

TSL 2 BASIC

Gene SMARCA4, Length 5,691 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMARCA4-203ENST00000429416 THAP2Q9H0W7 228 aa17.83■□□□□ 0.44
SMARCA4-203ENST00000429416 CRLS1Q9UJA2 301 aa17.83■□□□□ 0.44
SMARCA4-203ENST00000429416 CXCL14O95715 111 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 RHOAP61586 193 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 PDAP1Q13442 181 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 CENPKQ9BS16 269 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 KCNMB3Q9NPA1 279 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 MRPL42Q9Y6G3 142 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 STX7O15400 261 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 PPM1AP35813 382 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 CAPSQ13938 189 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 TMEM119Q4V9L6 283 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 COBLL1Q53SF7 1204 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 MAP4K3Q8IVH8 894 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 MAML1Q92585 1016 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 PTPRN2Q92932 1015 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 XPO6Q96QU8 1125 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 CDK5RAP1Q96SZ6 601 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 TREHO43280 583 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 NOL3O60936 208 aaKnown RBP17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 SLC47A2Q86VL8 602 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 LRGUKQ96M69 825 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 ZBTB18Q99592 522 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 TXNDC9O14530 226 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 TBX4P57082 545 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 PPIGQ13427 754 aaKnown RBP eCLIP17.82■□□□□ 0.441e-6■■■□□ 15.5
SMARCA4-203ENST00000429416 CCL14Q16627 93 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 USP41Q3LFD5 358 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 ZNF507Q8TCN5 953 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 BLOC1S5Q8TDH9 187 aa17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 XRN2Q9H0D6 950 aaKnown RBP eCLIP17.82■□□□□ 0.44
SMARCA4-203ENST00000429416 ZNF263O14978 683 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 C6orf118Q5T5N4 469 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 SUN2Q9UH99 717 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 AP3B1O00203 1094 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 GSTA4O15217 222 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 TMCC1O94876 653 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 MDM2Q00987 491 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 BYSLQ13895 437 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 HAS1Q92839 578 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 ERGIC2Q96RQ1 377 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 GPR20Q99678 358 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 MED4Q9NPJ6 270 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 ADCY2Q08462 1091 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 TTI2Q6NXR4 508 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 LRRC8DQ7L1W4 858 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 MTMR9Q96QG7 549 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 GTF3C4Q9UKN8 822 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 RTN3O95197 1032 aaPredicted RBP17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 CCDC130P13994 396 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 GFAPP14136 432 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 CCR1P32246 355 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 SLC12A3P55017 1021 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 EIF3BP55884 814 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 GLE1Q53GS7 698 aaKnown RBP17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 TPGS1Q6ZTW0 290 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 TFAP2DQ7Z6R9 452 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 NT5DC4Q86YG4 428 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 ADAM32Q8TC27 787 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 TLE6Q9H808 572 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 ATG16L1Q676U5 607 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 ASAH2Q9NR71 780 aa17.81■□□□□ 0.44
SMARCA4-203ENST00000429416 TMEM247A6NEH6 219 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 ITGB3BPQ13352 177 aaPredicted RBP17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 CENPPQ6IPU0 288 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 KIAA0895Q8NCT3 520 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 TMEM134Q9H6X4 195 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 FAM105AQ9NUU6 356 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 ARHGEF38Q9NXL2 777 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 B4GALT5O43286 388 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 GYPCP04921 128 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 SYN1P17600 705 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 MS4A14Q96JA4 679 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 RBPJLQ9UBG7 517 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 TNFSF13BQ9Y275 285 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 MTSS1O43312 755 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 EFCAB14O75071 495 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 SPATA31D3P0C874 917 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 SMPD1P17405 629 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 RBBP7Q16576 425 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 UGCGQ16739 394 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 PABPC1LQ4VXU2 614 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 SPATA31D4Q6ZUB0 917 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 TBC1D19Q8N5T2 526 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 RXFP2Q8WXD0 754 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 INPP4AQ96PE3 977 aaPredicted RBP17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 IRX2Q9BZI1 471 aaPredicted RBP17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 TRIM10Q9UDY6 481 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 TBC1D3BA6NDS4 549 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 LAMB3Q13751 1172 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 MYBPC2Q14324 1141 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 USP38Q8NB14 1042 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 TFB1MQ8WVM0 346 aaKnown RBP17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 BLOC1S4Q9NUP1 217 aa17.8■□□□□ 0.44
SMARCA4-203ENST00000429416 SUN1O94901 812 aa17.79■□□□□ 0.44
SMARCA4-203ENST00000429416 NCAPHQ15003 741 aa17.79■□□□□ 0.44
SMARCA4-203ENST00000429416 ZNF697Q5TEC3 545 aa17.79■□□□□ 0.44
SMARCA4-203ENST00000429416 FAM71DQ8N9W8 422 aa17.79■□□□□ 0.44
SMARCA4-203ENST00000429416 BCAS4Q8TDM0 211 aa17.79■□□□□ 0.44
SMARCA4-203ENST00000429416 ADAM33Q9BZ11 813 aa17.79■□□□□ 0.44
Retrieved 100 of 20,778 RNA–protein pairs in 314.1 ms