RNA–Protein interactions for RNA: ENST00000429277.6

LDB3-205, Transcript of LIM domain binding 3, humanhuman

TSL 2 BASIC

Gene LDB3, Length 5,436 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LDB3-205ENST00000429277 DDX28Q9NUL7 540 aaKnown RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 PLAGL2Q9UPG8 496 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 ZMYM2Q9UBW7 1377 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 UNC13BO14795 1591 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 FAM205CA6NFA0 338 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 B2RBV5 119 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 GYPCP04921 128 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 VCLP18206 1134 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 ANTXR2P58335 489 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 ARMC2Q8NEN0 867 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 CDK5RAP1Q96SZ6 601 aaKnown RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 TMEM245Q9H330 911 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 SPHKAPQ2M3C7 1700 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 SPATA31A1Q5TZJ5 1347 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 ADCY3O60266 1144 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 ALOX15P16050 662 aaPredicted RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 GMPSP49915 693 aaPredicted RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 SERPINB8P50452 374 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 RPS6P62753 249 aaKnown RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 KHDRBS1Q07666 443 aaKnown RBP eCLIP13.28□□□□□ -0.28
LDB3-205ENST00000429277 RFWD2Q8NHY2 731 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 RIN2Q8WYP3 895 aaPredicted RBP13.28□□□□□ -0.28
LDB3-205ENST00000429277 STAU2Q9NUL3 570 aaKnown RBP eCLIP13.28□□□□□ -0.28
LDB3-205ENST00000429277 DLC1Q96QB1 1528 aa13.28□□□□□ -0.28
LDB3-205ENST00000429277 AIM2O14862 343 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 NKRFO15226 690 aaKnown RBP eCLIP13.27□□□□□ -0.28
LDB3-205ENST00000429277 KIF1CO43896 1103 aaKnown RBP13.27□□□□□ -0.28
LDB3-205ENST00000429277 ITGB3P05106 788 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 MLNP12872 115 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 LSP1P33241 339 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 MPZL3Q6UWV2 235 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 KRT78Q8N1N4 520 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 THTPAQ9BU02 230 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 DBR1Q9UK59 544 aaKnown RBP13.27□□□□□ -0.28
LDB3-205ENST00000429277 SLC39A10Q9ULF5 831 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 PPP2R3BQ9Y5P8 575 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 PRR23D1E9PI22 279 aaPredicted RBP13.27□□□□□ -0.28
LDB3-205ENST00000429277 SEC24DO94855 1032 aaPredicted RBP13.27□□□□□ -0.28
LDB3-205ENST00000429277 PRR23D2P0DMB1 279 aaPredicted RBP13.27□□□□□ -0.28
LDB3-205ENST00000429277 TCF3P15923 654 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 COPAP53621 1224 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 BCAT1P54687 386 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 MRPS15P82914 257 aaKnown RBP13.27□□□□□ -0.28
LDB3-205ENST00000429277 ELAVL2Q12926 359 aaKnown RBP13.27□□□□□ -0.28
LDB3-205ENST00000429277 TRIP10Q15642 601 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 ZNF507Q8TCN5 953 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 WNK4Q96J92 1243 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 YIPF2Q9BWQ6 316 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 UBXN6Q9BZV1 441 aa13.27□□□□□ -0.28
LDB3-205ENST00000429277 NCAM2O15394 837 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 TOMM70O94826 608 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 IMPDH2P12268 514 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 RAD9BQ6WBX8 426 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 TPCN2Q8NHX9 752 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 DIS3LQ8TF46 1054 aaKnown RBP13.27□□□□□ -0.29
LDB3-205ENST00000429277 MRPS31Q92665 395 aaKnown RBP13.27□□□□□ -0.29
LDB3-205ENST00000429277 ATG4CQ96DT6 458 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 DDIT4Q9NX09 232 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 RAD54BQ9Y620 910 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 A0A0G2JLW4 131 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 IGF2BP3O00425 579 aaKnown RBP eCLIP13.27□□□□□ -0.29
LDB3-205ENST00000429277 IRF1P10914 325 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 MAPK7Q13164 816 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 BFSP2Q13515 415 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 SMAD1Q15797 465 aaKnown RBP13.27□□□□□ -0.29
LDB3-205ENST00000429277 ADRM1Q16186 407 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 PHKG1Q16816 387 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 LRRC71Q8N4P6 559 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 ECSITQ9BQ95 431 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 GANQ9H2C0 597 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 LRRC40Q9H9A6 602 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 WHRNQ9P202 907 aa13.27□□□□□ -0.29
LDB3-205ENST00000429277 CCT8L1PA6NM43 557 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 ANKRD65E5RJM6 399 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 F8W810 466 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 M0R3G1 203 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 GRAP2O75791 330 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 TGM2P21980 687 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 BRD2P25440 801 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 HS6ST3Q8IZP7 471 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 UBA3Q8TBC4 463 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 CYGBQ8WWM9 190 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 CGRRF1Q99675 332 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 APOL5Q9BWW9 433 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 C6orf203Q9P0P8 240 aaPredicted RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 M0QYT0 321 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 MSH4O15457 936 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 ALBP02768 609 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 PYGMP11217 842 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 KLRC1P26715 233 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 LHX1P48742 406 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 MRPS35P82673 323 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 CHI3L2Q15782 390 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 DENND1BQ6P3S1 775 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 IFNEQ86WN2 208 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 TRIM48Q8IWZ4 208 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 FAM71DQ8N9W8 422 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 MRPL48Q96GC5 212 aaKnown RBP13.26□□□□□ -0.29
LDB3-205ENST00000429277 SYTL2Q9HCH5 934 aa13.26□□□□□ -0.29
LDB3-205ENST00000429277 ZCCHC17Q9NP64 241 aaKnown RBP13.26□□□□□ -0.29
Retrieved 100 of 20,778 RNA–protein pairs in 28 ms