RNA–Protein interactions for RNA: ENST00000428026.6

PTPRU-204, Transcript of protein tyrosine phosphatase, receptor type U, humanhuman

TSL 1 (best) BASIC

Gene PTPRU, Length 5,550 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PTPRU-204ENST00000428026 SPDYE7PQ495Y7 208 aa15.06■□□□□ 0
PTPRU-204ENST00000428026 PLEKHA7Q6IQ23 1121 aa15.06■□□□□ 0
PTPRU-204ENST00000428026 KCNQ5Q9NR82 932 aa15.06■□□□□ 0
PTPRU-204ENST00000428026 FAM153AQ9UHL3 310 aa15.06■□□□□ 0
PTPRU-204ENST00000428026 ZSCAN5CA6NGD5 496 aaPredicted RBP15.05■□□□□ 0
PTPRU-204ENST00000428026 SASH3O75995 380 aa15.05■□□□□ 0
PTPRU-204ENST00000428026 KRT16P08779 473 aa15.05■□□□□ 0
PTPRU-204ENST00000428026 AVPR1AP37288 418 aa15.05■□□□□ 0
PTPRU-204ENST00000428026 CAP2P40123 477 aa15.05■□□□□ 0
PTPRU-204ENST00000428026 GTF2A2P52657 109 aa15.05■□□□□ 0
PTPRU-204ENST00000428026 BNIPLQ7Z465 357 aa15.05■□□□□ 0
PTPRU-204ENST00000428026 MFN1Q8IWA4 741 aa15.05■□□□□ 0
PTPRU-204ENST00000428026 CDC42EP4Q9H3Q1 356 aaKnown RBP15.05■□□□□ 0
PTPRU-204ENST00000428026 JPH1Q9HDC5 661 aaPredicted RBP15.05■□□□□ 0
PTPRU-204ENST00000428026 CD274Q9NZQ7 290 aa15.05■□□□□ 0
PTPRU-204ENST00000428026 C5orf58C9J3I9 102 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 ZNF23P17027 643 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 HSPA13P48723 471 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 NME5P56597 212 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 PAPD7Q5XG87 772 aaKnown RBP15.05■□□□□ -0
PTPRU-204ENST00000428026 SH3GL1Q99961 368 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 TMEM120AQ9BXJ8 343 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 DISP2A7MBM2 1401 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 HLA-DRAP01903 254 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 PDGFRBP09619 1106 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 AQP5P55064 265 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 PLA2G4FQ68DD2 849 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 GPAT2Q6NUI2 795 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 SETD3Q86TU7 594 aaPredicted RBP15.05■□□□□ -0
PTPRU-204ENST00000428026 IPMKQ8NFU5 416 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 UBA3Q8TBC4 463 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 DDI1Q8WTU0 396 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 PABPC5Q96DU9 382 aaKnown RBP15.05■□□□□ -0
PTPRU-204ENST00000428026 TSPAN17Q96FV3 270 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 ZNF197O14709 1029 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 NR3C2P08235 984 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 FBXO36Q8NEA4 188 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 BTN2A2Q8WVV5 523 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 GLMNQ92990 594 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 OTUB1Q96FW1 271 aaPredicted RBP15.05■□□□□ -0
PTPRU-204ENST00000428026 ABHD8Q96I13 439 aa15.05■□□□□ -0
PTPRU-204ENST00000428026 EEF2KO00418 725 aaKnown RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 GTF2H1P32780 548 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 AARS2Q5JTZ9 985 aaKnown RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 CCDC33Q8N5R6 958 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 GLIS2Q9BZE0 524 aaPredicted RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 RERGLQ9H628 205 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 PCDHB2Q9Y5E7 798 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 FNTAP49354 379 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 STAT5BP51692 787 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 TTC23LQ6PF05 361 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 SYN2Q92777 582 aaPredicted RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 WDR35Q9P2L0 1181 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 HPS5Q9UPZ3 1129 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 TFRCP02786 760 aaKnown RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 GTF2H3Q13889 308 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 TRIM25Q14258 630 aaKnown RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 ATPAF2Q8N5M1 289 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 PRCCQ92733 491 aaPredicted RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 TMEM237Q96Q45 408 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 NUDT12Q9BQG2 462 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 KLHL4Q9C0H6 718 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 DDX18Q9NVP1 670 aaKnown RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 APPL1Q9UKG1 709 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 AP4S1Q9Y587 144 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 NBNO60934 754 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 PTPN7P35236 360 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 ATP1A4Q13733 1029 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 RASA2Q15283 850 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 AASDHQ4L235 1098 aaPredicted RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 FEZF2Q8TBJ5 459 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 LATS2Q9NRM7 1088 aa15.04■□□□□ -0
PTPRU-204ENST00000428026 COPG1Q9Y678 874 aaKnown RBP15.04■□□□□ -0
PTPRU-204ENST00000428026 NDUFS3O75489 264 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 PSMA4P25789 261 aaKnown RBP15.03■□□□□ -0
PTPRU-204ENST00000428026 ERO1BQ86YB8 467 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 TTC39CQ8N584 583 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 EHD4Q9H223 541 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 RSAD1Q9HA92 442 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 DDTLA6NHG4 134 aaPredicted RBP15.03■□□□□ -0
PTPRU-204ENST00000428026 KBTBD13C9JR72 458 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 BGNP21810 368 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 ISLR2Q6UXK2 745 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 PHF21AQ96BD5 680 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 MPP4Q96JB8 637 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 IL1RAPL1Q9NZN1 696 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 PKP3Q9Y446 797 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 RNF103O00237 685 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 SERPIND1P05546 499 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 FGFR2P21802 821 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 APLFQ8IW19 511 aaPredicted RBP15.03■□□□□ -0
PTPRU-204ENST00000428026 MTERF3Q96E29 417 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 NSMCE4AQ9NXX6 385 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 SLC25A27O95847 323 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 CALB2P22676 271 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 DNAJC16Q9Y2G8 782 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 O00370 1275 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 TSC22D2O75157 780 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 SGPL1O95470 568 aa15.03■□□□□ -0
PTPRU-204ENST00000428026 IMPDH2P12268 514 aa15.03■□□□□ -0
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms