RNA–Protein interactions for RNA: ENST00000427897.1

HSPG2-205, Transcript of heparan sulfate proteoglycan 2, humanhuman

TSL 5

Gene HSPG2, Length 589 nt, Biotype non stop decay, Subcellular localisation Cytoplasm, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HSPG2-205ENST00000427897 ANGPT1Q15389 498 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 TTC16Q8NEE8 873 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 ERCC4Q92889 916 aaPredicted RBP22.02■■□□□ 1.12
HSPG2-205ENST00000427897 TRMT2BQ96GJ1 504 aaKnown RBP22.02■■□□□ 1.12
HSPG2-205ENST00000427897 ELOVL4Q9GZR5 314 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 LTB4R2Q9NPC1 389 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 TRPV5Q9NQA5 729 aa22.02■■□□□ 1.12
HSPG2-205ENST00000427897 UTP3Q9NQZ2 479 aaKnown RBP eCLIP22.02■■□□□ 1.126e-27■■■■■ 335.4
HSPG2-205ENST00000427897 NDRG2Q9UN36 371 aaKnown RBP22.02■■□□□ 1.12
HSPG2-205ENST00000427897 HLA-DRAP01903 254 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 TRIM49P0CI25 452 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 TRIM49CP0CI26 452 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 TXNDC8Q6A555 127 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 ISM2Q6H9L7 571 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 CC2D1AQ6P1N0 951 aaPredicted RBP22.01■■□□□ 1.11
HSPG2-205ENST00000427897 DENND5BQ6ZUT9 1274 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 ELMO3Q96BJ8 720 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 EEF2KMTQ96G04 330 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 SPATA17Q96L03 361 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 CEP295NLQ96MC4 621 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 MKNK1Q9BUB5 465 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 OSBPL6Q9BZF3 934 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 SMG9Q9H0W8 520 aaKnown RBP22.01■■□□□ 1.11
HSPG2-205ENST00000427897 DPEP3Q9H4B8 488 aa22.01■■□□□ 1.11
HSPG2-205ENST00000427897 SOBPA7XYQ1 873 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 WEE1P30291 646 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 MRE11P49959 708 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 TCERG1LQ5VWI1 586 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 MON1AQ86VX9 555 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 FAM3CQ92520 227 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 MYRFLQ96LU7 910 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 DDX23Q9BUQ8 820 aaKnown RBP22■■□□□ 1.11
HSPG2-205ENST00000427897 TDP1Q9NUW8 608 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 SPATA6Q9NWH7 488 aaPredicted RBP22■■□□□ 1.11
HSPG2-205ENST00000427897 PIAS3Q9Y6X2 628 aa22■■□□□ 1.11
HSPG2-205ENST00000427897 NUP210Q8TEM1 1887 aaPredicted RBP21.99■■□□□ 1.11
HSPG2-205ENST00000427897 TRAV19A0A0A6YYK7 116 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 CLDN5O00501 218 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 PSMA7O14818 248 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 LRRN2O75325 713 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 ABL1P00519 1130 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 CKMP06732 381 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 USP17L7P0C7H9 530 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 GLULP15104 373 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 MAGEA9P43362 315 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 FKBP3Q00688 224 aaKnown RBP21.99■■□□□ 1.11
HSPG2-205ENST00000427897 PLCB2Q00722 1185 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 ENPEPQ07075 957 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 FCHO2Q0JRZ9 810 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 IFRD2Q12894 506 aaPredicted RBP21.99■■□□□ 1.11
HSPG2-205ENST00000427897 RSPRY1Q96DX4 576 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 C8orf33Q9H7E9 229 aaPredicted RBP21.99■■□□□ 1.11
HSPG2-205ENST00000427897 KIF9Q9HAQ2 790 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 TRPM5Q9NZQ8 1165 aa21.99■■□□□ 1.11
HSPG2-205ENST00000427897 MTF2Q9Y483 593 aaPredicted RBP21.99■■□□□ 1.11
HSPG2-205ENST00000427897 MIA3Q5JRA6 1907 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 ZNF638Q14966 1978 aaKnown RBP21.98■■□□□ 1.11
HSPG2-205ENST00000427897 F8VP50 259 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 LAMTOR5O43504 91 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 PRAMEF12O95522 483 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 ASS1P00966 412 aaKnown RBP21.98■■□□□ 1.11
HSPG2-205ENST00000427897 GTF2H1P32780 548 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 PPP1R2P41236 205 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 PDE6CP51160 858 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 ZCWPW2Q504Y3 356 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 KRT39Q6A163 491 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 SPOPLQ6IQ16 392 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 TMEM150AQ86TG1 271 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 ACOT1Q86TX2 421 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 C1orf210Q8IVY1 113 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 TTC8Q8TAM2 541 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 MSANTD3Q96H12 275 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 ZFYVE19Q96K21 471 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 C8orf48Q96LL4 319 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 B3GNT5Q9BYG0 378 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 ZNF518BQ9C0D4 1074 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 TMEM8AQ9HCN3 771 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 NME7Q9Y5B8 376 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 TICRRQ7Z2Z1 1910 aa21.98■■□□□ 1.11
HSPG2-205ENST00000427897 GADD45BO75293 160 aaPredicted RBP21.97■■□□□ 1.11
HSPG2-205ENST00000427897 CCNE1P24864 410 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 TARSP26639 723 aaKnown RBP21.97■■□□□ 1.11
HSPG2-205ENST00000427897 HOXD11P31277 338 aaPredicted RBP21.97■■□□□ 1.11
HSPG2-205ENST00000427897 LRRC63Q05C16 580 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 PPP3CAQ08209 521 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 COBLL1Q53SF7 1204 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 DCAF17Q5H9S7 520 aaPredicted RBP21.97■■□□□ 1.11
HSPG2-205ENST00000427897 C1orf220Q5T0J3 134 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 ANKRD40Q6AI12 368 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 C1orf228Q6PIY5 440 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 ELOA2Q8IYF1 753 aaPredicted RBP21.97■■□□□ 1.11
HSPG2-205ENST00000427897 SLITRK1Q96PX8 696 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 PHOX2BQ99453 314 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 SDCBP2Q9H190 292 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 GKN1Q9NS71 199 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 NCANO14594 1321 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 WDFY4Q6ZS81 3184 aa21.97■■□□□ 1.11
HSPG2-205ENST00000427897 ZDBF2Q9HCK1 2354 aa21.96■■□□□ 1.11
HSPG2-205ENST00000427897 HDCP19113 662 aa21.96■■□□□ 1.11
HSPG2-205ENST00000427897 PPP3CCP48454 512 aa21.96■■□□□ 1.11
Retrieved 100 of 20,778 RNA–protein pairs in 34 ms