RNA–Protein interactions for RNA: ENST00000427534.6

SPG11-202, Transcript of SPG11, spatacsin vesicle trafficking associated, humanhuman

APPRIS ALT2 TSL 1 (best) BASIC

Gene SPG11, Length 6,935 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SPG11-202ENST00000427534 UTP6Q9NYH9 597 aaKnown RBP13.69□□□□□ -0.22
SPG11-202ENST00000427534 ADAM21Q9UKJ8 722 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 TBX20Q9UMR3 447 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 SPATA31A5Q5VU36 1347 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 SPATA31A7Q8IWB4 1347 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 RHOBTB3O94955 611 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 HHIPL2Q6UWX4 724 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 DET1Q7L5Y6 550 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 FBXO33Q7Z6M2 555 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 CDCA5Q96FF9 252 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 WDR24Q96S15 920 aa13.69□□□□□ -0.22
SPG11-202ENST00000427534 KATNA1O75449 491 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 CXCL8P10145 99 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 AP3M2P53677 418 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 C3orf67Q6ZVT6 689 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 HORMAD1Q86X24 394 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 PPP1R14AQ96A00 147 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 CLIP3Q96DZ5 547 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 RBM15Q96T37 977 aaKnown RBP eCLIP13.68□□□□□ -0.229e-7■■■■□ 22.2
SPG11-202ENST00000427534 RNF112Q9ULX5 631 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 ABCA9Q8IUA7 1624 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 KRT87PA6NCN2 255 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 PLEKP08567 350 aaPredicted RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 POU4F1Q01851 419 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 TRIM72Q6ZMU5 477 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 MARK2Q7KZI7 788 aaKnown RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 CBWD2Q8IUF1 395 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 EMC1Q8N766 993 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 MTBPQ96DY7 904 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 TSEN34Q9BSV6 310 aaKnown RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 LINC00854A0A1B0GVQ3 168 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 TARSL2A2RTX5 802 aaKnown RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 ENTPD3O75355 529 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 CALCAP01258 141 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 PYGBP11216 843 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 EPHB3P54753 998 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 CCDC81Q6ZN84 652 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 CHST13Q8NET6 341 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 PHF21AQ96BD5 680 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 OSBPL10Q9BXB5 764 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 ETNK1Q9HBU6 452 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 GMFGO60234 142 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 IL18RAPO95256 599 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 PTAR1Q7Z6K3 402 aaPredicted RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 FAM131BQ86XD5 332 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 ATP6V0D2Q8N8Y2 350 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 AHCYL2Q96HN2 611 aaKnown RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 TAF1DQ9H5J8 278 aaPredicted RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 H2AFY2Q9P0M6 372 aaPredicted RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 STX7O15400 261 aaKnown RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 GPC1P35052 558 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 NR1H3Q13133 447 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 HSP90AA5PQ58FG0 334 aa13.68□□□□□ -0.22
SPG11-202ENST00000427534 TFB1MQ8WVM0 346 aaKnown RBP13.68□□□□□ -0.22
SPG11-202ENST00000427534 TPST1O60507 370 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 MED24O75448 989 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 SCNN1BP51168 640 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 TERF2Q15554 542 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 DEPDC1Q5TB30 811 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 IARS2Q9NSE4 1012 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 EIF2AK3Q9NZJ5 1116 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 THEGQ9P2T0 379 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 PPRC1Q5VV67 1664 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 TBX3O15119 743 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 CTDNEP1O95476 244 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 RPS7P62081 194 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 GJC2Q5T442 439 aaPredicted RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 INTS5Q6P9B9 1019 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 PLEKHA8Q96JA3 519 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 CCDC3Q9BQI4 270 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 RUVBL2Q9Y230 463 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 CEMIPQ8WUJ3 1361 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 FAM187AA6NFU0 413 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 RNASEH1O60930 286 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 SRGNP10124 158 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 TPH1P17752 444 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 RFC5P40937 340 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 ADCYAP1R1P41586 468 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 TRIM60Q495X7 471 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 FNDC3BQ53EP0 1204 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 TRMT11Q7Z4G4 463 aaKnown RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 B3GALNT2Q8NCR0 500 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 FHDC1Q9C0D6 1143 aaPredicted RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 CAND2O75155 1236 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 ALDH2P05091 517 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 PLA2G4AP47712 749 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 LRRC23Q53EV4 343 aaPredicted RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 ZSCAN2Q7Z7L9 614 aaPredicted RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 FAM124AQ86V42 546 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 ST13P4Q8IZP2 240 aaPredicted RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 YIPF3Q9GZM5 350 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 COPS7BQ9H9Q2 264 aaPredicted RBP13.67□□□□□ -0.22
SPG11-202ENST00000427534 FASTKD2Q9NYY8 710 aaKnown RBP eCLIP13.67□□□□□ -0.22
SPG11-202ENST00000427534 CD163L1Q9NR16 1453 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 SKIP12755 728 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 OVGP1Q12889 678 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 ZNF697Q5TEC3 545 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 TTC39CQ8N584 583 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 KCNF1Q9H3M0 494 aa13.67□□□□□ -0.22
SPG11-202ENST00000427534 PLA2G4CQ9UP65 541 aa13.67□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 52.1 ms