RNA–Protein interactions for RNA: ENST00000427506.5

GPC1-205, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 573 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-205ENST00000427506 ADAM9Q13443 819 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 SGSM1Q2NKQ1 1148 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 ZACNQ401N2 412 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 MON1AQ86VX9 555 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 CLDN23Q96B33 292 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 ELMO3Q96BJ8 720 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 SPATA17Q96L03 361 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 C8orf33Q9H7E9 229 aaPredicted RBP19.65■□□□□ 0.74
GPC1-205ENST00000427506 TDP1Q9NUW8 608 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 NME7Q9Y5B8 376 aa19.65■□□□□ 0.74
GPC1-205ENST00000427506 SHISA7A6NL88 538 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 SOBPA7XYQ1 873 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 MAPK13O15264 365 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 AKAP3O75969 853 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 SP9P0CG40 484 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 PSMC2P35998 433 aaKnown RBP19.64■□□□□ 0.73
GPC1-205ENST00000427506 PIK3CAP42336 1068 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 RPS9P46781 194 aaKnown RBP19.64■□□□□ 0.73
GPC1-205ENST00000427506 NFIL3Q16649 462 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 DENND5BQ6ZUT9 1274 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 INTS8Q75QN2 995 aaKnown RBP19.64■□□□□ 0.73
GPC1-205ENST00000427506 SV2AQ7L0J3 742 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 FAM186BQ8IYM0 893 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 SMYD4Q8IYR2 804 aaPredicted RBP19.64■□□□□ 0.73
GPC1-205ENST00000427506 B3GALNT2Q8NCR0 500 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 TTC16Q8NEE8 873 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 USP13Q92995 863 aaPredicted RBP19.64■□□□□ 0.73
GPC1-205ENST00000427506 NKD2Q969F2 451 aaPredicted RBP19.64■□□□□ 0.73
GPC1-205ENST00000427506 MSANTD3Q96H12 275 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 CEP295NLQ96MC4 621 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 KIF9Q9HAQ2 790 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 GTSE1Q9NYZ3 720 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 EHD2Q9NZN4 543 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 HOOK1Q9UJC3 728 aaKnown RBP19.64■□□□□ 0.73
GPC1-205ENST00000427506 CCL26Q9Y258 94 aa19.64■□□□□ 0.73
GPC1-205ENST00000427506 MIA3Q5JRA6 1907 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 TICRRQ7Z2Z1 1910 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 TRAV19A0A0A6YYK7 116 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 F8VP50 259 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 TADA3O75528 432 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 SMC2O95347 1197 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 SOX9P48436 509 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 MLLT6P55198 1093 aaPredicted RBP19.63■□□□□ 0.73
GPC1-205ENST00000427506 FAM160A1Q05DH4 1040 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 CC2D1AQ6P1N0 951 aaPredicted RBP19.63■□□□□ 0.73
GPC1-205ENST00000427506 C1orf228Q6PIY5 440 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 TAF4BQ92750 862 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 TNIP3Q96KP6 325 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 MED10Q9BTT4 135 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 ELOVL4Q9GZR5 314 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 MMRN2Q9H8L6 949 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 LMAN1LQ9HAT1 526 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 GKN1Q9NS71 199 aa19.63■□□□□ 0.73
GPC1-205ENST00000427506 NUP210Q8TEM1 1887 aaPredicted RBP19.62■□□□□ 0.73
GPC1-205ENST00000427506 ATP8B3O60423 1300 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 SPECC1L-ADORA2AF8WAN1 911 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 CLDN5O00501 218 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 HLA-DRAP01903 254 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 CKMP06732 381 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 USP17L7P0C7H9 530 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 TRIM49P0CI25 452 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 TRIM49CP0CI26 452 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 GCLMP48507 274 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 CSTF1Q05048 431 aaKnown RBP19.62■□□□□ 0.73
GPC1-205ENST00000427506 TNK2Q07912 1038 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 FZD5Q13467 585 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 C1orf220Q5T0J3 134 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 ZC3H14Q6PJT7 736 aaKnown RBP19.62■□□□□ 0.73
GPC1-205ENST00000427506 ASCL5Q7RTU5 278 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 ENGASEQ8NFI3 743 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 C8orf48Q96LL4 319 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 CYP2S1Q96SQ9 504 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 B3GNT5Q9BYG0 378 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 IMPG2Q9BZV3 1241 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 ZNF518BQ9C0D4 1074 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 UTP3Q9NQZ2 479 aaKnown RBP eCLIP19.62■□□□□ 0.73
GPC1-205ENST00000427506 R4GN57 208 aa19.62■□□□□ 0.73
GPC1-205ENST00000427506 PRR23AA6NEV1 266 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 USP46P62068 366 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 IFRD2Q12894 506 aaPredicted RBP19.61■□□□□ 0.73
GPC1-205ENST00000427506 EDRF1Q3B7T1 1238 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 ITPRIPL2Q3MIP1 535 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 SPOPLQ6IQ16 392 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 RALGPS2Q86X27 583 aaPredicted RBP19.61■□□□□ 0.73
GPC1-205ENST00000427506 MAML2Q8IZL2 1156 aaPredicted RBP19.61■□□□□ 0.73
GPC1-205ENST00000427506 ARL14EPQ8N8R7 260 aaPredicted RBP19.61■□□□□ 0.73
GPC1-205ENST00000427506 SMARCE1Q969G3 411 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 GSDMAQ96QA5 445 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 SDCBP2Q9H190 292 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 TRPM5Q9NZQ8 1165 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 FBXO4Q9UKT5 387 aa19.61■□□□□ 0.73
GPC1-205ENST00000427506 COL4A2P08572 1712 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 C2orf78A6NCI8 922 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 CETN3O15182 167 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 ABL1P00519 1130 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 ASS1P00966 412 aaKnown RBP19.6■□□□□ 0.73
GPC1-205ENST00000427506 HDCP19113 662 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 TRIM21P19474 475 aaKnown RBP19.6■□□□□ 0.73
GPC1-205ENST00000427506 CTHP32929 405 aa19.6■□□□□ 0.73
GPC1-205ENST00000427506 PRCPP42785 496 aa19.6■□□□□ 0.73
Retrieved 100 of 20,778 RNA–protein pairs in 67.4 ms