RNA–Protein interactions for RNA: ENST00000427478.6

CNEP1R1-202, Transcript of CTD nuclear envelope phosphatase 1 regulatory subunit 1, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CNEP1R1, Length 2,117 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Endoplasmic reticulum, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNEP1R1-202ENST00000427478 MEIS3P2A8K0S8 358 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 PTGESO14684 152 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 KIF3CO14782 793 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 PDGFRBP09619 1106 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 KCNA10Q16322 511 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 HADHQ16836 314 aaKnown RBP22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 SV2CQ496J9 727 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 PKDCCQ504Y2 493 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 KCNT1Q5JUK3 1230 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 ATL2Q8NHH9 583 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 TXLNGYQ9BZA5 131 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 GDAP2Q9NXN4 497 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 ZKSCAN7Q9P0L1 754 aaPredicted RBP22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 HESX1Q9UBX0 185 aa22.9■■□□□ 1.26
CNEP1R1-202ENST00000427478 hCG_1818297A0A087WSY0 165 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 TJP3O95049 919 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 GAS8O95995 478 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 COPS2P61201 443 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 NKX3-2P78367 333 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 PTK6Q13882 451 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 TRIP13Q15645 432 aaPredicted RBP22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 TFDP3Q5H9I0 405 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 CEP85LQ5SZL2 805 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 PMF1Q6P1K2 205 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 RNF186Q9NXI6 227 aa22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 MTRF1LQ9UGC7 380 aaKnown RBP22.89■■□□□ 1.25
CNEP1R1-202ENST00000427478 THSD7BQ9C0I4 1608 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 LMO2P25791 158 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 NOGQ13253 232 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 LRIG3Q6UXM1 1119 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 SYDE1Q6ZW31 735 aaPredicted RBP22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 APPL2Q8NEU8 664 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 FAM76AQ8TAV0 307 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 ART4Q93070 314 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 MIS12Q9H081 205 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 FAM105AQ9NUU6 356 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 PCSK1NQ9UHG2 260 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 H0YGN5 161 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 GRAP2O75791 330 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 KRT7P08729 469 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 CCDC130P13994 396 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 GPD1P21695 349 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 PTPN7P35236 360 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 GNL1P36915 607 aaPredicted RBP22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 CDKN2BP42772 138 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 LMAN1P49257 510 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 SP3Q02447 781 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 TRNP1Q6NT89 227 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 SNX25Q9H3E2 840 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 FEZ2Q9UHY8 353 aaPredicted RBP22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 NFS1Q9Y697 457 aa22.88■■□□□ 1.25
CNEP1R1-202ENST00000427478 PDE4CQ08493 712 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 MGAT3Q09327 533 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 CALCOCO2Q13137 446 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 KCTD16Q68DU8 428 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 ARHGAP17Q68EM7 881 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 PPP1R10Q96QC0 940 aaKnown RBP22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 C3orf70A6NLC5 250 aaPredicted RBP22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 RNF8O76064 485 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 SETSIPP0DME0 302 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 ADORA2BP29275 332 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 MIPP30301 263 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 THPOP40225 353 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 MLH1P40692 756 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 VPS41P49754 854 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 ZNF143P52747 638 aaPredicted RBP22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 PMS2P54278 862 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 LILRA4P59901 499 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 ADGRF2Q8IZF7 708 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 KLHDC9Q8NEP7 349 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 SLC35F5Q8WV83 523 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 HAUS1Q96CS2 278 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 CACNG4Q9UBN1 327 aa22.87■■□□□ 1.25
CNEP1R1-202ENST00000427478 C2CD4BA6NLJ0 364 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 HUS1O60921 280 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 ZNF844Q08AG5 666 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 PTGISQ16647 500 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 SH2D3CQ8N5H7 860 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 RXFP2Q8WXD0 754 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 LPPQ93052 612 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 SNF8Q96H20 258 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 SLC4A5Q9BY07 1137 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 OSBPL7Q9BZF2 842 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 ASNSD1Q9NWL6 643 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 PSD3Q9NYI0 1048 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 WHRNQ9P202 907 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 DNPEPQ9ULA0 475 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 GRIN2DO15399 1336 aa22.86■■□□□ 1.25
CNEP1R1-202ENST00000427478 LIASO43766 372 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 PDGFRAP16234 1089 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 LRPAP1P30533 357 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 ACAP1Q15027 740 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 SH3PXD2AQ5TCZ1 1133 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 OLFML1Q6UWY5 402 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 AGO3Q9H9G7 860 aaKnown RBP22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 USP18Q9UMW8 372 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 NEU2Q9Y3R4 380 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 ATF2P15336 505 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 TAF5Q15542 800 aa22.85■■□□□ 1.25
CNEP1R1-202ENST00000427478 C15orf59Q2T9L4 293 aaPredicted RBP22.85■■□□□ 1.25
Retrieved 100 of 20,778 RNA–protein pairs in 30.4 ms