RNA–Protein interactions for RNA: ENST00000427461.1

LSG1-202, Transcript of large 60S subunit nuclear export GTPase 1, humanhuman

TSL 5

Gene LSG1, Length 755 nt, Biotype nonsense mediated decay, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LSG1-202ENST00000427461 SEZ6Q53EL9 994 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 C6orf118Q5T5N4 469 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 ARHGAP40Q5TG30 622 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 SDHAF4Q5VUM1 108 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 DSTYKQ6XUX3 929 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 DHX32Q7L7V1 743 aaKnown RBP9.95□□□□□ -0.82
LSG1-202ENST00000427461 C12orf40Q86WS4 652 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 ZCCHC9Q8N567 271 aaKnown RBP9.95□□□□□ -0.82
LSG1-202ENST00000427461 SH3RF2Q8TEC5 729 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 LRRC15Q8TF66 581 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 MRPS31Q92665 395 aaKnown RBP9.95□□□□□ -0.82
LSG1-202ENST00000427461 WBP1Q96G27 269 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 NAF1Q96HR8 494 aaKnown RBP9.95□□□□□ -0.82
LSG1-202ENST00000427461 OXCT2Q9BYC2 517 aaPredicted RBP9.95□□□□□ -0.82
LSG1-202ENST00000427461 SLC6A17Q9H1V8 727 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 HSFX1Q9UBD0 423 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 SUSD2Q9UGT4 822 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 TNFSF13BQ9Y275 285 aa9.95□□□□□ -0.82
LSG1-202ENST00000427461 ANAPC1Q9H1A4 1944 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 CCDC196A0A1B0GTZ2 297 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 SCAMP3O14828 347 aaKnown RBP9.94□□□□□ -0.82
LSG1-202ENST00000427461 PPEF2O14830 753 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 TRIM66O15016 1216 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 TNFSF14O43557 240 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 CCNT1O60563 726 aaKnown RBP9.94□□□□□ -0.82
LSG1-202ENST00000427461 KRT38O76015 456 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 KAT7O95251 611 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 NFATC1O95644 943 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 CKMP06732 381 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 ZNF883P0CG24 379 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 HARSP12081 509 aaKnown RBP9.94□□□□□ -0.82
LSG1-202ENST00000427461 JUPP14923 745 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 CPA1P15085 419 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 ADSSP30520 456 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 NAMPTP43490 491 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 AARSP49588 968 aaKnown RBP eCLIP9.94□□□□□ -0.82
LSG1-202ENST00000427461 GUCY2FP51841 1108 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 ZXDBP98169 803 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 RHDQ02161 417 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 KDSRQ06136 332 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 SLC10A6Q3KNW5 377 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 ZNF568Q3ZCX4 644 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 SYCP2LQ5T4T6 812 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 ARMCX5Q6P1M9 558 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 TMPRSS12Q86WS5 348 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 ARL14EPQ8N8R7 260 aaPredicted RBP9.94□□□□□ -0.82
LSG1-202ENST00000427461 TTC9Q92623 222 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 FGF11Q92914 225 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 PNKPQ96T60 521 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 RNF26Q9BY78 433 aaPredicted RBP9.94□□□□□ -0.82
LSG1-202ENST00000427461 MIR1-1HGQ9H1L0 117 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 PTPRHQ9HD43 1115 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 KCNK4Q9NYG8 393 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 ANKMY1Q9P2S6 941 aa9.94□□□□□ -0.82
LSG1-202ENST00000427461 RELNP78509 3460 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 CABIN1Q9Y6J0 2220 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 A0A1B0GTW7 788 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 MYMKA6NI61 221 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 BTBD18B2RXH4 712 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 NDUFS2O75306 463 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 CER1O95813 267 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 APODP05090 189 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 CYP17A1P05093 508 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 HAPLN1P10915 354 aaPredicted RBP9.93□□□□□ -0.82
LSG1-202ENST00000427461 NDUFV2P19404 249 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 RCAN1P53805 252 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 TARDBPQ13148 414 aaKnown RBP eCLIP9.93□□□□□ -0.82
LSG1-202ENST00000427461 HSF5Q4G112 596 aaPredicted RBP9.93□□□□□ -0.82
LSG1-202ENST00000427461 LRRTM3Q86VH5 581 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 MCPH1Q8NEM0 835 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 SPATA18Q8TC71 538 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 TMEM176AQ96HP8 235 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 AIFM3Q96NN9 605 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 NACC1Q96RE7 527 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 ACO2Q99798 780 aaKnown RBP9.93□□□□□ -0.82
LSG1-202ENST00000427461 SH3GLB2Q9NR46 395 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 ARHGEF4Q9NR80 690 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 ABI2Q9NYB9 513 aaPredicted RBP9.93□□□□□ -0.82
LSG1-202ENST00000427461 HCN2Q9UL51 889 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 NBPF19A0A087WUL8 3843 aa9.93□□□□□ -0.82
LSG1-202ENST00000427461 TRAV19A0A0A6YYK7 116 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 A0A1W2PQF6 199 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 C2orf78A6NCI8 922 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 CBX4O00257 560 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 ABLIM1O14639 778 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 KCNK3O14649 394 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 BRINP1O60477 761 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 USP17L7P0C7H9 530 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 HOXB2P14652 356 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 TYMPP19971 482 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 TNFSF9P41273 254 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 RTP5Q14D33 572 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 PKDCCQ504Y2 493 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 WDR45BQ5MNZ6 344 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 USP49Q70CQ1 688 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 APBB1IPQ7Z5R6 666 aaPredicted RBP9.92□□□□□ -0.82
LSG1-202ENST00000427461 NEK8Q86SG6 692 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 ERICH1Q86X53 443 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 MIB1Q86YT6 1006 aa9.92□□□□□ -0.82
LSG1-202ENST00000427461 ZNF513Q8N8E2 541 aaPredicted RBP9.92□□□□□ -0.82
Retrieved 100 of 20,778 RNA–protein pairs in 30.5 ms