RNA–Protein interactions for RNA: ENST00000427187.6

VNN3-208, Transcript of vanin 3, humanhuman

TSL 1 (best) BASIC

Gene VNN3, Length 1,214 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VNN3-208ENST00000427187 NOL4O94818 638 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 KLF8O95600 359 aaPredicted RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 CFIP05156 583 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 USP17L7P0C7H9 530 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 ENGP17813 658 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 POLR2BP30876 1174 aaKnown RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 TIE1P35590 1138 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 PRPHP41219 470 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 SLC6A11P48066 632 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 FAM193AP78312 1265 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 SIM1P81133 766 aaPredicted RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 ATP2C1P98194 919 aaPredicted RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 CRY1Q16526 586 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 GAB4Q2WGN9 574 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 SV2CQ496J9 727 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 EMC10Q5UCC4 262 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 C19orf48Q6RUI8 117 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 OSTM1Q86WC4 334 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 SCN4BQ8IWT1 228 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 ZSWIM2Q8NEG5 633 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 OR2I1PQ8NGU4 316 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 EXOC4Q96A65 974 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 ERLEC1Q96DZ1 483 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 CNOT6LQ96LI5 555 aaKnown RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 TSPAN18Q96SJ8 248 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 FIZ1Q96SL8 496 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 LLPHQ9BRT6 129 aaKnown RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 GTPBP2Q9BX10 602 aaKnown RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 DDX43Q9NXZ2 648 aaKnown RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 KCND2Q9NZV8 630 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 GCNT4Q9P109 453 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 BCCIPQ9P287 314 aaKnown RBP eCLIP9.32□□□□□ -0.92
VNN3-208ENST00000427187 MBD1Q9UIS9 605 aaPredicted RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 KCNG1Q9UIX4 513 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 GTF3C4Q9UKN8 822 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 MMP17Q9ULZ9 603 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 L1RE1Q9UN81 338 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 DERAQ9Y315 318 aa9.32□□□□□ -0.92
VNN3-208ENST00000427187 MYO18AQ92614 2054 aaKnown RBP9.32□□□□□ -0.92
VNN3-208ENST00000427187 CEP192Q8TEP8 1941 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 SGK1O00141 431 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 MAP3K13O43283 966 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 ATP2C2O75185 946 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 SEC24BO95487 1268 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 CYP17A1P05093 508 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 ITGB3P05106 788 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 KRT18P05783 430 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 HDCP19113 662 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 ITPKAP23677 461 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 P2RY2P41231 377 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 RPL10AP62906 217 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 TFAMQ00059 246 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 KDSRQ06136 332 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 SMARCB1Q12824 385 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 NR1H3Q13133 447 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 MCM6Q14566 821 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 KCNB1Q14721 858 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 INTS6LQ5JSJ4 861 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 MCTP1Q6DN14 999 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 CRELD2Q6UXH1 353 aaPredicted RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 LPCAT2Q7L5N7 544 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 FILIP1Q7Z7B0 1213 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 C11orf74Q86VG3 221 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 C12orf40Q86WS4 652 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 CHCHD4Q8N4Q1 142 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 TXNDC5Q8NBS9 432 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 OLIG1Q8TAK6 271 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 HMGB4Q8WW32 186 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 TRMT2BQ96GJ1 504 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 PKMYT1Q99640 499 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 NUSAP1Q9BXS6 441 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 CCSER1Q9C0I3 900 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 SLC32A1Q9H598 525 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 ASB7Q9H672 318 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 TMEM206Q9H813 350 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 PARVGQ9HBI0 331 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 UXTQ9UBK9 157 aaPredicted RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 AGO2Q9UKV8 859 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 ODF2LQ9ULJ1 636 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 AGAP1Q9UPQ3 857 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 MSRB2Q9Y3D2 182 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 C2CD2Q9Y426 696 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 NEUROG3Q9Y4Z2 214 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 GCN1Q92616 2671 aaKnown RBP9.31□□□□□ -0.92
VNN3-208ENST00000427187 ADAMTS20P59510 1910 aa9.31□□□□□ -0.92
VNN3-208ENST00000427187 IGSF10Q6WRI0 2623 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 TCRBV21S2A2A0A5A6 115 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 SOBPA7XYQ1 873 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 LEFTY2O00292 366 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 TBCAO75347 108 aaKnown RBP9.3□□□□□ -0.92
VNN3-208ENST00000427187 NFATC1O95644 943 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 PLCG1P19174 1290 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 PAX3P23760 479 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 ZNF131P52739 623 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 USP46P62068 366 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 PSMC1P62191 440 aaKnown RBP9.3□□□□□ -0.92
VNN3-208ENST00000427187 HMGN5P82970 282 aaKnown RBP9.3□□□□□ -0.92
VNN3-208ENST00000427187 GRIN1Q05586 938 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 LMAN2Q12907 356 aa9.3□□□□□ -0.92
VNN3-208ENST00000427187 NFE2Q16621 373 aaPredicted RBP9.3□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 70.6 ms