RNA–Protein interactions for RNA: ENST00000426878.2

LMCD1-204, Transcript of LIM and cysteine rich domains 1, humanhuman

TSL 2 BASIC

Gene LMCD1, Length 1,431 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LMCD1-204ENST00000426878 WDR44Q5JSH3 913 aa18.33■□□□□ 0.53
LMCD1-204ENST00000426878 PAQR9Q6ZVX9 377 aa18.33■□□□□ 0.53
LMCD1-204ENST00000426878 SRRTQ9BXP5 876 aaKnown RBP18.33■□□□□ 0.53
LMCD1-204ENST00000426878 PLA2G2FQ9BZM2 168 aa18.33■□□□□ 0.53
LMCD1-204ENST00000426878 ZNF518BQ9C0D4 1074 aa18.33■□□□□ 0.53
LMCD1-204ENST00000426878 SLITRK6Q9H5Y7 841 aa18.33■□□□□ 0.53
LMCD1-204ENST00000426878 ATP8B3O60423 1300 aa18.33■□□□□ 0.52
LMCD1-204ENST00000426878 GREB1Q4ZG55 1949 aa18.33■□□□□ 0.52
LMCD1-204ENST00000426878 ZNF318Q5VUA4 2279 aa18.33■□□□□ 0.52
LMCD1-204ENST00000426878 P4HA2O15460 535 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 CILPO75339 1184 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 TRIM21P19474 475 aaKnown RBP18.32■□□□□ 0.52
LMCD1-204ENST00000426878 FMO5P49326 533 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 STXBP5Q5T5C0 1151 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 GPR158Q5T848 1215 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 ACOT1Q86TX2 421 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 TRIM59Q8IWR1 403 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 TTLL2Q9BWV7 592 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 UTP3Q9NQZ2 479 aaKnown RBP eCLIP18.32■□□□□ 0.52
LMCD1-204ENST00000426878 EHD2Q9NZN4 543 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 HMGXB4Q9UGU5 601 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 FBXL21Q9UKT6 434 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 MAGED2Q9UNF1 606 aaPredicted RBP18.32■□□□□ 0.52
LMCD1-204ENST00000426878 F8VP50 259 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 CFHP08603 1231 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 ANXA13P27216 316 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 PFKPQ01813 784 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 DENND5BQ6ZUT9 1274 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 ARID3BQ8IVW6 561 aaPredicted RBP18.32■□□□□ 0.52
LMCD1-204ENST00000426878 MFSD6LQ8IWD5 586 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 SUGP1Q8IWZ8 645 aaKnown RBP18.32■□□□□ 0.52
LMCD1-204ENST00000426878 FUKQ8N0W3 1084 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 GPT2Q8TD30 523 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 WHAMMQ8TF30 809 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 DEPDC1BQ8WUY9 529 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 MED15Q96RN5 788 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 NT5C1AQ9BXI3 368 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 SLC46A2Q9BY10 475 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 DNAI2Q9GZS0 605 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 TMEM30AQ9NV96 361 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 OBP2AQ9NY56 170 aa18.32■□□□□ 0.52
LMCD1-204ENST00000426878 NUP210Q8TEM1 1887 aaPredicted RBP18.31■□□□□ 0.52
LMCD1-204ENST00000426878 CLDN5O00501 218 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 TADA3O75528 432 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 PDGFBP01127 241 aaPredicted RBP18.31■□□□□ 0.52
LMCD1-204ENST00000426878 COL9A1P20849 921 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 VIPR2P41587 438 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 CACNA2D1P54289 1103 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 CYP4F8P98187 520 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 CT47A1Q5JQC4 288 aaPredicted RBP18.31■□□□□ 0.52
LMCD1-204ENST00000426878 VITQ6UXI7 678 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 FAM35AQ86V20 835 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 MON1AQ86VX9 555 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 SIX5Q8N196 739 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 STKLD1Q8NE28 680 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 MRPS31Q92665 395 aaKnown RBP18.31■□□□□ 0.52
LMCD1-204ENST00000426878 TATDN2Q93075 761 aa18.31■□□□□ 0.52
LMCD1-204ENST00000426878 TRMT61BQ9BVS5 477 aaKnown RBP18.31■□□□□ 0.52
LMCD1-204ENST00000426878 ARIH1Q9Y4X5 557 aaPredicted RBP18.31■□□□□ 0.52
LMCD1-204ENST00000426878 KRBA1A5PL33 1030 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 CCDC192P0DO97 292 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 NPR3P17342 541 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 PSMC3P17980 439 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 CLCN5P51795 746 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 FCHO2Q0JRZ9 810 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 RBM43Q6ZSC3 357 aaKnown RBP18.3■□□□□ 0.52
LMCD1-204ENST00000426878 CMTM8Q8IZV2 173 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 C12orf29Q8N999 325 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 SMARCD1Q96GM5 515 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 TWNKQ96RR1 684 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 HNRNPABQ99729 332 aaKnown RBP18.3■□□□□ 0.52
LMCD1-204ENST00000426878 CSNK1G1Q9HCP0 422 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 DMAP1Q9NPF5 467 aaPredicted RBP18.3■□□□□ 0.52
LMCD1-204ENST00000426878 TRPV5Q9NQA5 729 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 CISHQ9NSE2 258 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 OBSL1O75147 1896 aa18.3■□□□□ 0.52
LMCD1-204ENST00000426878 WDFY4Q6ZS81 3184 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 HEPACAM2A8MVW5 462 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 CD58P19256 250 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 ERCC5P28715 1186 aaPredicted RBP18.29■□□□□ 0.52
LMCD1-204ENST00000426878 PPP3CCP48454 512 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 CETN1Q12798 172 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 KCNH2Q12809 1159 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 ORC1Q13415 861 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 CUL2Q13617 745 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 PHLDB3Q6NSJ2 640 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 SLC2A14Q8TDB8 520 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 DNASE1L2Q92874 299 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 RSPRY1Q96DX4 576 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 MED10Q9BTT4 135 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 KCNH6Q9H252 994 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 MFSD1Q9H3U5 465 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 ARHGEF3Q9NR81 526 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 IL37Q9NZH6 218 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 DACH1Q9UI36 760 aa18.29■□□□□ 0.52
LMCD1-204ENST00000426878 UTP18Q9Y5J1 556 aaKnown RBP eCLIP18.29■□□□□ 0.52
LMCD1-204ENST00000426878 ZNF638Q14966 1978 aaKnown RBP18.28■□□□□ 0.52
LMCD1-204ENST00000426878 RTN3O95197 1032 aaPredicted RBP18.28■□□□□ 0.52
LMCD1-204ENST00000426878 CCDC130P13994 396 aa18.28■□□□□ 0.52
LMCD1-204ENST00000426878 PFKLP17858 780 aa18.28■□□□□ 0.52
Retrieved 100 of 20,778 RNA–protein pairs in 41.8 ms