RNA–Protein interactions for RNA: ENST00000426280.3

GPC1-204, Transcript of glypican 1, humanhuman

TSL 3

Gene GPC1, Length 636 nt, Biotype protein coding, Subcellular localisation Cytosol, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
GPC1-204ENST00000426280 CSH2P0DML3 217 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 HOXC13P31276 330 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 PSMC2P35998 433 aaKnown RBP13.59□□□□□ -0.23
GPC1-204ENST00000426280 GRIK1P39086 918 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 MAGEA11P43364 429 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 ASPAP45381 313 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 AP3M2P53677 418 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 PTPN5P54829 565 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 RPL10AP62906 217 aaKnown RBP13.59□□□□□ -0.23
GPC1-204ENST00000426280 ZXDBP98169 803 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 TNK2Q07912 1038 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 TAF12Q16514 161 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 SGSM1Q2NKQ1 1148 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 ACOT1Q86TX2 421 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 ZC3H3Q8IXZ2 948 aaKnown RBP13.59□□□□□ -0.23
GPC1-204ENST00000426280 CMTM8Q8IZV2 173 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 PJA1Q8NG27 643 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 WHAMMQ8TF30 809 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 SMARCE1Q969G3 411 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 FUBP3Q96I24 572 aaKnown RBP eCLIP13.59□□□□□ -0.23
GPC1-204ENST00000426280 GSDMAQ96QA5 445 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 DUSP9Q99956 384 aaKnown RBP13.59□□□□□ -0.23
GPC1-204ENST00000426280 LTB4R2Q9NPC1 389 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 GTSE1Q9NYZ3 720 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 FRMD4BQ9Y2L6 1034 aa13.59□□□□□ -0.23
GPC1-204ENST00000426280 PPP1R3GB7ZBB8 358 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 BIN1O00499 593 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 CDC25CP30307 473 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 PGFP49763 221 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 NDST1P52848 882 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 PRKCQQ04759 706 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 FCHO2Q0JRZ9 810 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 UBXN2BQ14CS0 331 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 EDRF1Q3B7T1 1238 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 COBLL1Q53SF7 1204 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 TXNDC11Q6PKC3 985 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 MON1AQ86VX9 555 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 ELOA2Q8IYF1 753 aaPredicted RBP13.58□□□□□ -0.24
GPC1-204ENST00000426280 C12orf29Q8N999 325 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 B3GALNT2Q8NCR0 500 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 ZMIZ2Q8NF64 920 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 ATOH1Q92858 354 aaPredicted RBP13.58□□□□□ -0.24
GPC1-204ENST00000426280 TATDN2Q93075 761 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 CHFRQ96EP1 664 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 TRMT2BQ96GJ1 504 aaKnown RBP13.58□□□□□ -0.24
GPC1-204ENST00000426280 CLSTN2Q9H4D0 955 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 GCNT4Q9P109 453 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 HOOK1Q9UJC3 728 aaKnown RBP13.58□□□□□ -0.24
GPC1-204ENST00000426280 MUC6Q6W4X9 2439 aa13.58□□□□□ -0.24
GPC1-204ENST00000426280 OBSL1O75147 1896 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 ZNF263O14978 683 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 KIF20AO95235 890 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 SMC2O95347 1197 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 CCDC130P13994 396 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 WEE1P30291 646 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 PIK3CAP42336 1068 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 MRE11P49959 708 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 PFKPQ01813 784 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 ANGPT1Q15389 498 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 CBWD6Q4V339 395 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 ARHGAP15Q53QZ3 475 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 CBWD3Q5JTY5 395 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 CBWD5Q5RIA9 395 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 TRIM68Q6AZZ1 485 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 C4orf50Q6ZRC1 276 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 INTS8Q75QN2 995 aaKnown RBP13.57□□□□□ -0.24
GPC1-204ENST00000426280 FUKQ8N0W3 1084 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 ARL14EPQ8N8R7 260 aaPredicted RBP13.57□□□□□ -0.24
GPC1-204ENST00000426280 DEPDC1BQ8WUY9 529 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 DNASE1L2Q92874 299 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 SPATA17Q96L03 361 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 C8orf48Q96LL4 319 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 SMOQ99835 787 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 BCO2Q9BYV7 579 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 ELOVL4Q9GZR5 314 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 RNF38Q9H0F5 515 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 GKN1Q9NS71 199 aa13.57□□□□□ -0.24
GPC1-204ENST00000426280 NDRG2Q9UN36 371 aaKnown RBP13.57□□□□□ -0.24
GPC1-204ENST00000426280 TICRRQ7Z2Z1 1910 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 CHADO15335 359 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 FGF19O95750 216 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 CCNE1P24864 410 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 RPL13P26373 211 aaKnown RBP13.56□□□□□ -0.24
GPC1-204ENST00000426280 MORC3Q14149 939 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 NAIF1Q69YI7 327 aaPredicted RBP13.56□□□□□ -0.24
GPC1-204ENST00000426280 VSTM1Q6UX27 236 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 DENND5BQ6ZUT9 1274 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 FAM35AQ86V20 835 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 CRYBG2Q8N1P7 616 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 SCAMP5Q8TAC9 235 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 BPIFB1Q8TDL5 484 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 IRF7Q92985 503 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 SHDQ96IW2 340 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 MED15Q96RN5 788 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 ARID3AQ99856 593 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 FAM83CQ9BQN1 747 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 TTLL2Q9BWV7 592 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 TMEM8AQ9HCN3 771 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 TRPC7Q9HCX4 862 aa13.56□□□□□ -0.24
GPC1-204ENST00000426280 TRPV5Q9NQA5 729 aa13.56□□□□□ -0.24
Retrieved 100 of 20,778 RNA–protein pairs in 33.8 ms