RNA–Protein interactions for RNA: ENST00000425989.5

HDLBP-211, Transcript of high density lipoprotein binding protein, humanhuman

TSL 5

Gene HDLBP, Length 530 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDLBP-211ENST00000425989 ENC1O14682 589 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 CTIFO43310 598 aaKnown RBP10.13□□□□□ -0.79
HDLBP-211ENST00000425989 RNF8O76064 485 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 CFHP08603 1231 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 FAM200BP0CF97 657 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 NPR3P17342 541 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 FGFR3P22607 806 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 RWDD2BP57060 319 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 SLC6A3Q01959 620 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 PDE4CQ08493 712 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 PDCLQ13371 301 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 INTS6LQ5JSJ4 861 aaKnown RBP10.13□□□□□ -0.79
HDLBP-211ENST00000425989 ANKS3Q6ZW76 656 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 XYLT1Q86Y38 959 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 RHOT1Q8IXI2 618 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 UBA3Q8TBC4 463 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 PHOSPHO2Q8TCD6 241 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 TRIM43Q96BQ3 446 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-211ENST00000425989 ZNF689Q96CS4 500 aaPredicted RBP10.13□□□□□ -0.79
HDLBP-211ENST00000425989 CPXM1Q96SM3 734 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 MED10Q9BTT4 135 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 MTIF3Q9H2K0 278 aaKnown RBP10.13□□□□□ -0.79
HDLBP-211ENST00000425989 CSNK1G1Q9HCP0 422 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 COMMD8Q9NX08 183 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 RRN3Q9NYV6 651 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 HMGXB4Q9UGU5 601 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 MAFFQ9ULX9 164 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 SSX2IPQ9Y2D8 614 aa10.13□□□□□ -0.79
HDLBP-211ENST00000425989 KCNK3O14649 394 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 PSTPIP1O43586 416 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 SPOPO43791 374 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 CALCAP01258 141 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 LAG3P18627 525 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 COMTP21964 271 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 CTNNA1P35221 906 aaKnown RBP10.12□□□□□ -0.79
HDLBP-211ENST00000425989 BRCC3P46736 316 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 PEX5P50542 639 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 COPS2P61201 443 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 USP41Q3LFD5 358 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 PTPN20Q4JDL3 420 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 GLE1Q53GS7 698 aaKnown RBP10.12□□□□□ -0.79
HDLBP-211ENST00000425989 OR6B2Q6IFH4 312 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 PMF1Q6P1K2 205 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 VSTM1Q6UX27 236 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 BEND5Q7L4P6 421 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 OSTM1Q86WC4 334 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 TTC30AQ86WT1 665 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 CREG2Q8IUH2 290 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 FUKQ8N0W3 1084 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 RASGEF1CQ8N431 466 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 C3orf58Q8NDZ4 430 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 SLC2A14Q8TDB8 520 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 IRGQQ8WZA9 623 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 UBXN4Q92575 508 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 CD101Q93033 1021 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 SMARCD1Q96GM5 515 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 PAAF1Q9BRP4 392 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 B3GNT5Q9BYG0 378 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 LRRC4Q9HBW1 653 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 CNGB3Q9NQW8 809 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 ST7Q9NRC1 585 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 HOMER3Q9NSC5 361 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 DDX56Q9NY93 547 aaKnown RBP10.12□□□□□ -0.79
HDLBP-211ENST00000425989 HSFX1Q9UBD0 423 aa10.12□□□□□ -0.79
HDLBP-211ENST00000425989 CCDC188H7C350 402 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 FANCGO15287 622 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 FTCDO95954 541 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 KRT7P08729 469 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 CSF2RAP15509 400 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 EN2P19622 333 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-211ENST00000425989 IBSPP21815 317 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-211ENST00000425989 MCM3P25205 808 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 PCK1P35558 622 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 PPM1AP35813 382 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 MAGEA11P43364 429 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 ZNF143P52747 638 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-211ENST00000425989 BCAR1P56945 870 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 FPGSQ05932 587 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 BOLA3Q53S33 107 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 MDH1BQ5I0G3 518 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 ZNF280DQ6N043 979 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 CC2D1AQ6P1N0 951 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-211ENST00000425989 PSRC1Q6PGN9 363 aaPredicted RBP10.11□□□□□ -0.79
HDLBP-211ENST00000425989 LIN28BQ6ZN17 250 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDLBP-211ENST00000425989 PAQR9Q6ZVX9 377 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 SLC26A9Q7LBE3 791 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 POLNQ7Z5Q5 900 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 RCOR2Q8IZ40 523 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 RABGGTAQ92696 567 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 GOLGA1Q92805 767 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 RUNDC3BQ96NL0 473 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 BUD13Q9BRD0 619 aaKnown RBP eCLIP10.11□□□□□ -0.79
HDLBP-211ENST00000425989 CNPY3Q9BT09 278 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 TTPALQ9BTX7 342 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 CARD6Q9BX69 1037 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 ZCWPW1Q9H0M4 648 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 DPEP3Q9H4B8 488 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 PRDM16Q9HAZ2 1276 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 CRTAC1Q9NQ79 661 aa10.11□□□□□ -0.79
HDLBP-211ENST00000425989 PRDM5Q9NQX1 630 aaPredicted RBP10.11□□□□□ -0.79
Retrieved 100 of 20,778 RNA–protein pairs in 36.6 ms