RNA–Protein interactions for RNA: ENST00000425239.5

ATG4B-209, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 2

Gene ATG4B, Length 807 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-209ENST00000425239 MTMR12Q9C0I1 747 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 SMOC1Q9H4F8 434 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 PCIF1Q9H4Z3 704 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 TMEM206Q9H813 350 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 CRTAC1Q9NQ79 661 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 INTS13Q9NVM9 706 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 DUS2Q9NX74 493 aaKnown RBP16.07■□□□□ 0.16
ATG4B-209ENST00000425239 UXTQ9UBK9 157 aaPredicted RBP16.07■□□□□ 0.16
ATG4B-209ENST00000425239 CCDC39Q9UFE4 941 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 PCDHGA5Q9Y5G8 931 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 WNT6Q9Y6F9 365 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 PTPRDP23468 1912 aa16.07■□□□□ 0.16
ATG4B-209ENST00000425239 DCLK1O15075 740 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 PRPF6O94906 941 aaKnown RBP16.06■□□□□ 0.16
ATG4B-209ENST00000425239 GCNT3O95395 438 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 USP17L7P0C7H9 530 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 PMLP29590 882 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 USP46P62068 366 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 RBP5P82980 135 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 AMPD2Q01433 879 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 MYL7Q01449 175 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 FBXO43Q4G163 708 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 N4BP2L1Q5TBK1 243 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-209ENST00000425239 LMBRD2Q68DH5 695 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-209ENST00000425239 CC2D1AQ6P1N0 951 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-209ENST00000425239 ARL14EPQ8N8R7 260 aaPredicted RBP16.06■□□□□ 0.16
ATG4B-209ENST00000425239 RPLP0P6Q8NHW5 317 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 CD101Q93033 1021 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 SPATA17Q96L03 361 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 HHIPQ96QV1 700 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 PANK2Q9BZ23 570 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 CHD6Q8TD26 2715 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 ABCA7Q8IZY2 2146 aa16.06■□□□□ 0.16
ATG4B-209ENST00000425239 K7EQS6 105 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 SYT1P21579 422 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 OPRD1P41143 372 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 SLC39A14Q15043 492 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 STPG1Q5TH74 334 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 ADGRF2Q8IZF7 708 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 GPD1LQ8N335 351 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 CPA6Q8N4T0 437 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 SH3RF2Q8TEC5 729 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 DDX1Q92499 740 aaKnown RBP16.05■□□□□ 0.16
ATG4B-209ENST00000425239 LSM14BQ9BX40 385 aaKnown RBP16.05■□□□□ 0.16
ATG4B-209ENST00000425239 RNF38Q9H0F5 515 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 PANK4Q9NVE7 773 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 ARHGAP26Q9UNA1 814 aa16.05■□□□□ 0.16
ATG4B-209ENST00000425239 HELZP42694 1942 aaKnown RBP16.05■□□□□ 0.16
ATG4B-209ENST00000425239 TRAV19A0A0A6YYK7 116 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 CST3P01034 146 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-209ENST00000425239 CCDC192P0DO97 292 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 HDCP19113 662 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 PCSK1P29120 753 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 MPLP40238 635 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 SHC2P98077 582 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 MESP2Q0VG99 397 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 ALCAMQ13740 583 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 DMC1Q14565 340 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 AASDHQ4L235 1098 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-209ENST00000425239 TCEAL6Q6IPX3 200 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 VSTM1Q6UX27 236 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 CBWD2Q8IUF1 395 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 SPATA2LQ8IUW3 424 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-209ENST00000425239 ADGRG2Q8IZP9 1017 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 ATP2A3Q93084 1043 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 TCEAL3Q969E4 200 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 HPS3Q969F9 1004 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 HPDLQ96IR7 371 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 CEP295NLQ96MC4 621 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 USP28Q96RU2 1077 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 TTLL2Q9BWV7 592 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 GZF1Q9H116 711 aaPredicted RBP16.04■□□□□ 0.16
ATG4B-209ENST00000425239 TRPC7Q9HCX4 862 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 TMEM30AQ9NV96 361 aa16.04■□□□□ 0.16
ATG4B-209ENST00000425239 VPS37CA5D8V6 355 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-209ENST00000425239 OLFM2O95897 454 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 CKMP06732 381 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 KRT19P08727 400 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 IDEP14735 1019 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 WARSP23381 471 aaKnown RBP16.03■□□□□ 0.16
ATG4B-209ENST00000425239 BDNFP23560 247 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 PSMC1P62191 440 aaKnown RBP16.03■□□□□ 0.16
ATG4B-209ENST00000425239 CEBPZQ03701 1054 aaKnown RBP16.03■□□□□ 0.16
ATG4B-209ENST00000425239 E2F4Q16254 413 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 CCDC73Q6ZRK6 1079 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 EPM2AIP1Q7L775 607 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-209ENST00000425239 RASSF3Q86WH2 238 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 SCN4BQ8IWT1 228 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 SYCP3Q8IZU3 236 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 USP33Q8TEY7 942 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 MYLPFQ96A32 169 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 PCED1BQ96HM7 432 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 SYT15Q9BQS2 421 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 VPS45Q9NRW7 570 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 MAGEC2Q9UBF1 373 aaPredicted RBP16.03■□□□□ 0.16
ATG4B-209ENST00000425239 CDH9Q9ULB4 789 aa16.03■□□□□ 0.16
ATG4B-209ENST00000425239 NUP205Q92621 2012 aa16.02■□□□□ 0.16
ATG4B-209ENST00000425239 CEP295Q9C0D2 2601 aa16.02■□□□□ 0.16
ATG4B-209ENST00000425239 A0A0A0MRY4 1105 aa16.02■□□□□ 0.16
ATG4B-209ENST00000425239 BCLAF3A2AJT9 711 aaKnown RBP16.02■□□□□ 0.16
Retrieved 100 of 20,778 RNA–protein pairs in 22.5 ms