RNA–Protein interactions for RNA: ENST00000424011.6

CMTM3-202, Transcript of CKLF like MARVEL transmembrane domain containing 3, humanhuman

APPRIS P1 TSL 2 BASIC

Gene CMTM3, Length 2,330 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CMTM3-202ENST00000424011 SNX9Q9Y5X1 595 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 HMGB1P1B2RPK0 211 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-202ENST00000424011 NDUFAB1O14561 156 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 SEPT4O43236 478 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 ECEL1O95672 775 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 MYZAPP0CAP1 466 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 KCNE1P15382 129 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 HOXD10P28358 340 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 GABRB2P47870 512 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 CACNB2Q08289 660 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-202ENST00000424011 XKR4Q5GH76 650 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 LCLAT1Q6UWP7 414 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 KDM7AQ6ZMT4 941 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 SYDE1Q6ZW31 735 aaPredicted RBP17.42■□□□□ 0.38
CMTM3-202ENST00000424011 CD99L2Q8TCZ2 262 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 GRK7Q8WTQ7 553 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 ZNF560Q96MR9 790 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 CENPHQ9H3R5 247 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 LRRC4CQ9HCJ2 640 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 TUBGCP4Q9UGJ1 667 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 GTF2IRD1Q9UHL9 959 aa17.42■□□□□ 0.38
CMTM3-202ENST00000424011 GOLGA6L10A6NI86 522 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 CYP3A5P20815 502 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 COPS2P61201 443 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 ORC1Q13415 861 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 C9orf57Q5W0N0 161 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 UNC93AQ86WB7 457 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 TMEM130Q8N3G9 435 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 APOL6Q9BWW8 343 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 MYADML2A6NDP7 307 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 RASSF9O75901 435 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 NR1D1P20393 614 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 AKAP5P24588 427 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 GPD2P43304 727 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 MRPS6P82932 125 aaKnown RBP17.41■□□□□ 0.38
CMTM3-202ENST00000424011 PDCLQ13371 301 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 UBXN11Q5T124 520 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 MICALCLQ6ZW33 695 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 CPXM1Q96SM3 734 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 OSBPL8Q9BZF1 889 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 EPB41L4BQ9H329 900 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 CYTH4Q9UIA0 394 aa17.41■□□□□ 0.38
CMTM3-202ENST00000424011 SMIM28A0A1B0GU29 152 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 GOLGA8SH3BPF8 625 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 RALAP11233 206 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 SNX16P57768 344 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 SNX1Q13596 522 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 ACAP1Q15027 740 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 SPDYCQ5MJ68 293 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 FBXO47Q5MNV8 452 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 ZFYVE27Q5T4F4 411 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 EMC10Q5UCC4 262 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 POLNQ7Z5Q5 900 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 XYLT1Q86Y38 959 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 C18orf25Q96B23 403 aaPredicted RBP17.4■□□□□ 0.38
CMTM3-202ENST00000424011 CHST7Q9NS84 486 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 TRPV2Q9Y5S1 764 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 RALGAPA2Q2PPJ7 1873 aa17.4■□□□□ 0.38
CMTM3-202ENST00000424011 ELNP15502 786 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 PSMA2P25787 234 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 ZNF252P-AS1Q0IIN9 211 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 NFX1Q12986 1120 aaKnown RBP17.39■□□□□ 0.38
CMTM3-202ENST00000424011 KLF1Q13351 362 aaPredicted RBP17.39■□□□□ 0.38
CMTM3-202ENST00000424011 GLRA4Q5JXX5 417 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 TWF2Q6IBS0 349 aaKnown RBP17.39■□□□□ 0.38
CMTM3-202ENST00000424011 CXCL17Q6UXB2 119 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 HACE1Q8IYU2 909 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 ATG4AQ8WYN0 398 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 TSPAN16Q9UKR8 245 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 IPPQ9Y573 584 aa17.39■□□□□ 0.38
CMTM3-202ENST00000424011 F8VP50 259 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 PIRO00625 290 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 TJP3O95049 919 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 GAS8O95995 478 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 ERBB2P04626 1255 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 RFC1P35251 1148 aaPredicted RBP17.39■□□□□ 0.37
CMTM3-202ENST00000424011 GJC1P36383 396 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 PPP1R7Q15435 360 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 CCNG2Q16589 344 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 HADHQ16836 314 aaKnown RBP17.39■□□□□ 0.37
CMTM3-202ENST00000424011 DPH6Q7L8W6 267 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 MCRS1Q96EZ8 462 aa17.39■□□□□ 0.37
CMTM3-202ENST00000424011 MTRF1LQ9UGC7 380 aaKnown RBP17.39■□□□□ 0.37
CMTM3-202ENST00000424011 PGK1P00558 417 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 GNRH1P01148 92 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 KRT1P04264 644 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 KRT7P08729 469 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 SETSIPP0DME0 302 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 PRKAR2AP13861 404 aaKnown RBP17.38■□□□□ 0.37
CMTM3-202ENST00000424011 PTPN7P35236 360 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 PMS2P54278 862 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 OGDHQ02218 1023 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 ACTN3Q08043 901 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-202ENST00000424011 ZKSCAN8Q15776 578 aaPredicted RBP17.38■□□□□ 0.37
CMTM3-202ENST00000424011 FAM228AQ86W67 206 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 ATL2Q8NHH9 583 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 DCLK3Q9C098 648 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 CXCL16Q9H2A7 254 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 CHST12Q9NRB3 414 aa17.38■□□□□ 0.37
CMTM3-202ENST00000424011 GDAP2Q9NXN4 497 aa17.38■□□□□ 0.37
Retrieved 100 of 20,778 RNA–protein pairs in 37.2 ms