RNA–Protein interactions for RNA: ENST00000422869.6

CTCFL-204, Transcript of CCCTC-binding factor like, humanhuman

TSL 1 (best) BASIC

Gene CTCFL, Length 2,966 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CTCFL-204ENST00000422869 USP37Q86T82 979 aa13.3□□□□□ -0.28
CTCFL-204ENST00000422869 BSNDQ8WZ55 320 aa13.3□□□□□ -0.28
CTCFL-204ENST00000422869 DNAJB4Q9UDY4 337 aa13.3□□□□□ -0.28
CTCFL-204ENST00000422869 LY75O60449 1722 aa13.3□□□□□ -0.28
CTCFL-204ENST00000422869 KLF11O14901 512 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 PYGBP11216 843 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 PTK7Q13308 1070 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 CES4AQ5XG92 561 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 FAM196AQ6ZSG2 479 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 RAPH1Q70E73 1250 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 IGDCC3Q8IVU1 814 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 SP8Q8IXZ3 490 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 TTC1Q99614 292 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 FAM213AQ9BRX8 229 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 GINM1Q9NU53 330 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 SLC4A7Q9Y6M7 1214 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 DCAF8L1A6NGE4 600 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 WNT7BP56706 349 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 AP2B1P63010 937 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 LRRC38Q5VT99 294 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 TMEM270Q6UE05 265 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 CDHR3Q6ZTQ4 885 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 PALM2Q8IXS6 379 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 GPD1LQ8N335 351 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 TAB3Q8N5C8 712 aaPredicted RBP13.29□□□□□ -0.28
CTCFL-204ENST00000422869 DTNBP1Q96EV8 351 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 TMX4Q9H1E5 349 aaPredicted RBP13.29□□□□□ -0.28
CTCFL-204ENST00000422869 EBF3Q9H4W6 596 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 KCNK4Q9NYG8 393 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 COL20A1Q9P218 1284 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 MRPL11Q9Y3B7 192 aaKnown RBP13.29□□□□□ -0.28
CTCFL-204ENST00000422869 PDLIM1O00151 329 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 KDSRQ06136 332 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 FAAP100Q0VG06 881 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 PABPC1LQ4VXU2 614 aaKnown RBP13.29□□□□□ -0.28
CTCFL-204ENST00000422869 BRDTQ58F21 947 aaPredicted RBP13.29□□□□□ -0.28
CTCFL-204ENST00000422869 SMC1BQ8NDV3 1235 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 SHKBP1Q8TBC3 707 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 ACER1Q8TDN7 264 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 ITFG2Q969R8 447 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 CYTH2Q99418 400 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 THTPAQ9BU02 230 aa13.29□□□□□ -0.28
CTCFL-204ENST00000422869 APOBEC3GQ9HC16 384 aaKnown RBP13.29□□□□□ -0.28
CTCFL-204ENST00000422869 AGO4Q9HCK5 861 aaKnown RBP13.29□□□□□ -0.28
CTCFL-204ENST00000422869 FRMD4AQ9P2Q2 1039 aaPredicted RBP13.29□□□□□ -0.28
CTCFL-204ENST00000422869 C3orf70A6NLC5 250 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 HLA-DRAP01903 254 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 SPATA31D3P0C874 917 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 ETS2P15036 469 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 MMP8P22894 467 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 RPL22P35268 128 aaKnown RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 SOX10P56693 466 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 DMP1Q13316 513 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 HNRNPDQ14103 355 aaKnown RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 BBS9Q3SYG4 887 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 TDRD10Q5VZ19 366 aaKnown RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 SPATA31D4Q6ZUB0 917 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 MARK2Q7KZI7 788 aaKnown RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 SLC25A41Q8N5S1 370 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 PPP2R3CQ969Q6 453 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 OPTNQ96CV9 577 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 MCEEQ96PE7 176 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 CENPKQ9BS16 269 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 MECRQ9BV79 373 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 CHMP2BQ9UQN3 213 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 PTPRJQ12913 1337 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 IQANK1A0A1B0GTG1 560 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 TCRBV9S1A1TA0A576 114 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 TCRBV5S1A1TA0A578 114 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 VNN1O95497 513 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 BAG2O95816 211 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 GYS1P13807 737 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 CLDN10P78369 228 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 LSAMPQ13449 338 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 ZACNQ401N2 412 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 LRRC23Q53EV4 343 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 DNAJC14Q6Y2X3 702 aaPredicted RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 SLC44A1Q8WWI5 657 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 VCX3BQ9H321 246 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 GPAMQ9HCL2 828 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 VCX3AQ9NNX9 186 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 KMT5AQ9NQR1 393 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 PPARGC1AQ9UBK2 798 aaKnown RBP13.28□□□□□ -0.28
CTCFL-204ENST00000422869 PPME1Q9Y570 386 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 WDR81Q562E7 1941 aa13.28□□□□□ -0.28
CTCFL-204ENST00000422869 KAT6AQ92794 2004 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 NPM3O75607 178 aaKnown RBP13.27□□□□□ -0.28
CTCFL-204ENST00000422869 CIB2O75838 187 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 RANBP1P43487 201 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 DYNLT1P63172 113 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 OTUD4Q01804 1114 aaKnown RBP13.27□□□□□ -0.28
CTCFL-204ENST00000422869 CUL2Q13617 745 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 KBTBD12Q3ZCT8 623 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 XKR9Q5GH70 373 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 WDR44Q5JSH3 913 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 TMCO4Q5TGY1 634 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 C1orf146Q5VVC0 180 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 ACAD11Q709F0 780 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 C4orf19Q8IY42 314 aa13.27□□□□□ -0.28
CTCFL-204ENST00000422869 ACTL9Q8TC94 416 aa13.27□□□□□ -0.28
Retrieved 100 of 20,778 RNA–protein pairs in 66.4 ms