RNA–Protein interactions for RNA: ENST00000421922.6

CCDC28B-202, Transcript of coiled-coil domain containing 28B, humanhuman

TSL 1 (best) BASIC

Gene CCDC28B, Length 1,415 nt, Biotype protein coding, Subcellular localisation Ribosome .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CCDC28B-202ENST00000421922 CAPN6Q9Y6Q1 641 aa18.09■□□□□ 0.49
CCDC28B-202ENST00000421922 RANBP2P49792 3224 aaKnown RBP18.09■□□□□ 0.49
CCDC28B-202ENST00000421922 MYBPHLA2RUH7 354 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 CLDN5O00501 218 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 AP1G2O75843 785 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 CPB1P15086 417 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 ACADSBP45954 432 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 RGS7P49802 495 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 NFE2Q16621 373 aaPredicted RBP18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 PTPN20Q4JDL3 420 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 C2CD6Q53TS8 623 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 CYP4A22Q5TCH4 519 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 KIAA0319Q5VV43 1072 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 PHLDB2Q86SQ0 1253 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 FUKQ8N0W3 1084 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 SLC39A11Q8N1S5 342 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 OR10T2Q8NGX3 314 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 PCED1BQ96HM7 432 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 RAD9AQ99638 391 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 RTP3Q9BQQ7 232 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 SELENOOQ9BVL4 669 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 DUSP16Q9BY84 665 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 B3GNT5Q9BYG0 378 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 STK39Q9UEW8 545 aa18.08■□□□□ 0.49
CCDC28B-202ENST00000421922 GOLGA8SH3BPF8 625 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 XPO1O14980 1071 aaKnown RBP18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 PALMO75781 387 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 HTRA4P83105 476 aaPredicted RBP18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 TAP1Q03518 808 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 KRT17Q04695 432 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 SLC39A12Q504Y0 691 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 OR6B2Q6IFH4 312 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 DCUN1D2Q6PH85 259 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 DAAM2Q86T65 1068 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 TMEM173Q86WV6 379 aaPredicted RBP18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 WDTC1Q8N5D0 677 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 TPCN2Q8NHX9 752 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 STK32AQ8WU08 396 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 BCL7CQ8WUZ0 217 aaPredicted RBP18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 CPXM1Q96SM3 734 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 ZCWPW1Q9H0M4 648 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 OSGEPQ9NPF4 335 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 SALL4Q9UJQ4 1053 aa18.07■□□□□ 0.48
CCDC28B-202ENST00000421922 TMEM110-MUSTN1A8MSY1 372 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 URODP06132 367 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 ARPP19P56211 112 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 TCEAL1Q15170 157 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 CCDC142Q17RM4 750 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 PKDCCQ504Y2 493 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 FAM171BQ6P995 826 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 C3orf20Q8ND61 904 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 RIN2Q8WYP3 895 aaPredicted RBP18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 B3GALT6Q96L58 329 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 HSFY1Q96LI6 401 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 RNPC3Q96LT9 517 aaKnown RBP18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 WDR24Q96S15 920 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 HERC2P3Q9BVR0 1158 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 CYLDQ9NQC7 956 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 CYTH4Q9UIA0 394 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 LCMT1Q9UIC8 334 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 ANAPC7Q9UJX3 599 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 PCDHGC5Q9Y5F6 944 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 GRID2IPA4D2P6 1211 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 E5RJQ4 531 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 MTA2O94776 668 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 SOD2P04179 222 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 ERBB2P04626 1255 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 DESP17661 470 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 PLA2G4AP47712 749 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 GLUD2P49448 558 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 HADHBP55084 474 aaKnown RBP18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 MAP3K7CLP57077 242 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 PTP4A2Q12974 167 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 ZNF268Q14587 947 aaPredicted RBP18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 PSMD5Q16401 504 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 RTP2Q5QGT7 225 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 FAM102AQ5T9C2 384 aaPredicted RBP18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 PLEKHA7Q6IQ23 1121 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 SIX6OS1Q8N1H7 587 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 SLC35F5Q8WV83 523 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 TMEM209Q96SK2 561 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 LRRC4Q9HBW1 653 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 DMAP1Q9NPF5 467 aaPredicted RBP18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 ABI2Q9NYB9 513 aaPredicted RBP18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 CHORDC1Q9UHD1 332 aaPredicted RBP18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 RWDD3Q9Y3V2 267 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 JRKLQ9Y4A0 524 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 PCDHB5Q9Y5E4 795 aa18.06■□□□□ 0.48
CCDC28B-202ENST00000421922 NLRC5Q86WI3 1866 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 PTPRDP23468 1912 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 MYO1FO00160 1098 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 PIK3R2O00459 728 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 OR4Q2P0C623 313 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 LCP1P13796 627 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 BDNFP23560 247 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 CA8P35219 290 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 MAGEA10P43363 369 aaPredicted RBP18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 GABRB2P47870 512 aa18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 MRPL58Q14197 206 aaKnown RBP18.05■□□□□ 0.48
CCDC28B-202ENST00000421922 MESDQ14696 234 aa18.05■□□□□ 0.48
Retrieved 100 of 20,778 RNA–protein pairs in 151.1 ms