RNA–Protein interactions for RNA: ENST00000420709.5

PRAME-207, Transcript of preferentially expressed antigen in melanoma, humanhuman

APPRIS ALT2 TSL 2

Gene PRAME, Length 705 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PRAME-207ENST00000420709 KCNA4P22459 653 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 BDNFP23560 247 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 HOXA6P31267 233 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 IFNAR2P48551 515 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 ASIC1P78348 528 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 CYP27A1Q02318 531 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 MYO1EQ12965 1108 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 PDGFRLQ15198 375 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 SF3A2Q15428 464 aaKnown RBP13.75□□□□□ -0.21
PRAME-207ENST00000420709 E2F4Q16254 413 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 CSRP2Q16527 193 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 CFAP221Q4G0U5 840 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 FAM171BQ6P995 826 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 KBTBD6Q86V97 674 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 CPA6Q8N4T0 437 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 LINC00301Q8NCQ3 95 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 RPLP0P6Q8NHW5 317 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 SPATA18Q8TC71 538 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 SH3RF2Q8TEC5 729 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 OSCP1Q8WVF1 389 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 EZH1Q92800 747 aaPredicted RBP13.75□□□□□ -0.21
PRAME-207ENST00000420709 FUBP3Q96I24 572 aaKnown RBP eCLIP13.75□□□□□ -0.21
PRAME-207ENST00000420709 MYRFLQ96LU7 910 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 MMS19Q96T76 1030 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 P2RY13Q9BPV8 354 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 ARRDC1-AS1Q9H2J1 176 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 TNMDQ9H2S6 317 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 ZSCAN16Q9H4T2 348 aaPredicted RBP13.75□□□□□ -0.21
PRAME-207ENST00000420709 MAGEC2Q9UBF1 373 aaPredicted RBP13.75□□□□□ -0.21
PRAME-207ENST00000420709 CDH9Q9ULB4 789 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 MORC2Q9Y6X9 1032 aaPredicted RBP13.75□□□□□ -0.21
PRAME-207ENST00000420709 SPAG17Q6Q759 2223 aa13.75□□□□□ -0.21
PRAME-207ENST00000420709 HELZP42694 1942 aaKnown RBP13.74□□□□□ -0.21
PRAME-207ENST00000420709 MYO16Q9Y6X6 1858 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 SDK1Q7Z5N4 2213 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 SLC30A4O14863 429 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 CLIC2O15247 247 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 SPTLC2O15270 562 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 DLATP10515 647 aaKnown RBP13.74□□□□□ -0.21
PRAME-207ENST00000420709 CASP1P29466 404 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 GRIK1P39086 918 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 USP46P62068 366 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 PSMD2Q13200 908 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 KCNB1Q14721 858 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 DUOXA2Q1HG44 320 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 EML3Q32P44 896 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 FOXD4L6Q3SYB3 417 aaPredicted RBP13.74□□□□□ -0.21
PRAME-207ENST00000420709 MDH1BQ5I0G3 518 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 FOXD4L3Q6VB84 417 aaPredicted RBP13.74□□□□□ -0.21
PRAME-207ENST00000420709 C4orf50Q6ZRC1 276 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 STXBP4Q6ZWJ1 553 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 NELFCDQ8IXH7 590 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 GAB3Q8WWW8 586 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 CD101Q93033 1021 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 INTS4Q96HW7 963 aaKnown RBP13.74□□□□□ -0.21
PRAME-207ENST00000420709 MRPL45Q9BRJ2 306 aaKnown RBP13.74□□□□□ -0.21
PRAME-207ENST00000420709 TRIM9Q9C026 710 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 LINC00597Q9H2U6 94 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 SMOC1Q9H4F8 434 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 KBTBD4Q9NVX7 518 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 GCNT4Q9P109 453 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 NME7Q9Y5B8 376 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 PTPRDP23468 1912 aa13.74□□□□□ -0.21
PRAME-207ENST00000420709 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP13.73□□□□□ -0.21
PRAME-207ENST00000420709 ANTXRLA6NF34 631 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 K7ELQ4 463 aaPredicted RBP13.73□□□□□ -0.21
PRAME-207ENST00000420709 KIAA0391O15091 583 aaKnown RBP13.73□□□□□ -0.21
PRAME-207ENST00000420709 EIF3DO15371 548 aaKnown RBP eCLIP13.73□□□□□ -0.21
PRAME-207ENST00000420709 TGFB1I1O43294 461 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 ATG13O75143 517 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 CST3P01034 146 aaPredicted RBP13.73□□□□□ -0.21
PRAME-207ENST00000420709 HDCP19113 662 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 DRD1P21728 446 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 WARSP23381 471 aaKnown RBP13.73□□□□□ -0.21
PRAME-207ENST00000420709 MAGEA11P43364 429 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 CYP2J2P51589 502 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 ZXDBP98169 803 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 AMPD2Q01433 879 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 SURF1Q15526 300 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 AASDHQ4L235 1098 aaPredicted RBP13.73□□□□□ -0.21
PRAME-207ENST00000420709 PPM1JQ5JR12 505 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 FAM26FQ5R3K3 315 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 DPH6Q7L8W6 267 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 TRAPPC11Q7Z392 1133 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 CACNA2D4Q7Z3S7 1137 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 LIMS2Q7Z4I7 341 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 WDR49Q8IV35 697 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 FSIP1Q8NA03 581 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 ATP2A3Q93084 1043 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 PCED1BQ96HM7 432 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 AGPAT3Q9NRZ7 376 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 RXFP3Q9NSD7 469 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 KIAA1549LQ6ZVL6 1849 aa13.73□□□□□ -0.21
PRAME-207ENST00000420709 SCAMP3O14828 347 aaKnown RBP13.72□□□□□ -0.21
PRAME-207ENST00000420709 EPN2O95208 641 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 TNNI1P19237 187 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 ANXA13P27216 316 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 CACNA2D1P54289 1103 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 SEC13P55735 322 aa13.72□□□□□ -0.21
PRAME-207ENST00000420709 IFRD2Q12894 506 aaPredicted RBP13.72□□□□□ -0.21
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms