RNA–Protein interactions for RNA: ENST00000417664.6

SSBP3-205, Transcript of single stranded DNA binding protein 3, humanhuman

TSL 5 BASIC

Gene SSBP3, Length 1,666 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SSBP3-205ENST00000417664 GABRDO14764 452 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 FGFR1P11362 822 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 CKBP12277 381 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 DESP17661 470 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 PCK1P35558 622 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 LHX1P48742 406 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 RPL34P49207 117 aaKnown RBP17.67■□□□□ 0.42
SSBP3-205ENST00000417664 AARSP49588 968 aaKnown RBP eCLIP17.67■□□□□ 0.424e-6■■■■■ 36.2
SSBP3-205ENST00000417664 ZNF143P52747 638 aaPredicted RBP17.67■□□□□ 0.42
SSBP3-205ENST00000417664 HLTFQ14527 1009 aaKnown RBP eCLIP17.67■□□□□ 0.42
SSBP3-205ENST00000417664 ARCQ7LC44 396 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 CCDC105Q8IYK2 499 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 JOSD2Q8TAC2 188 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 HSFY1Q96LI6 401 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 ADAM2Q99965 735 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 CNPY3Q9BT09 278 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 MED4Q9NPJ6 270 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 FAM49BQ9NUQ9 324 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 PHF24Q9UPV7 400 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 TCRBV7S2A1N4TA0A589 114 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 MEIS3P2A8K0S8 358 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 INPPL1O15357 1258 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 TJP3O95049 919 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 RALAP11233 206 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 PTGIRP43119 386 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 SLC8A3P57103 927 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 GRIK3Q13003 919 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 CCNG2Q16589 344 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 ALS2CLQ60I27 953 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 OR6B2Q6IFH4 312 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 PMF1Q6P1K2 205 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 B3GALNT2Q8NCR0 500 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 UROC1Q96N76 676 aa17.67■□□□□ 0.42
SSBP3-205ENST00000417664 HNRNPABQ99729 332 aaKnown RBP17.67■□□□□ 0.42
SSBP3-205ENST00000417664 C2CD4BA6NLJ0 364 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 KBTBD13C9JR72 458 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 ARVCFO00192 962 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 MGEA5O60502 916 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 LRCH4O75427 683 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 ECEL1O95672 775 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 KRT1P04264 644 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 PDGFRBP09619 1106 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 GPD1P21695 349 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 LMO2P25791 158 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 SLC25A11Q02978 314 aaKnown RBP17.66■□□□□ 0.42
SSBP3-205ENST00000417664 PDE4CQ08493 712 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 HSP90B2PQ58FF3 399 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 DAB2IPQ5VWQ8 1189 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 FAM183BPQ6ZVS7 135 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 LPPQ93052 612 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 LRRC45Q96CN5 670 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 SENP8Q96LD8 212 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 SLITRK1Q96PX8 696 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 DPEP3Q9H4B8 488 aa17.66■□□□□ 0.42
SSBP3-205ENST00000417664 PCNTO95613 3336 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 ARHGEF37A1IGU5 675 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 DPYSL4O14531 572 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 DAPK3O43293 454 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 EOMESO95936 686 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 ECHS1P30084 290 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 SCNN1GP51170 649 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 CBX1P83916 185 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 SLC6A3Q01959 620 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 UPP1Q16831 310 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 TFDP3Q5H9I0 405 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 ZFYVE27Q5T4F4 411 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 TTC27Q6P3X3 843 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 OLFML1Q6UWY5 402 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 PLEKHA4Q9H4M7 779 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 MIOSQ9NXC5 875 aa17.65■□□□□ 0.42
SSBP3-205ENST00000417664 XPO1O14980 1071 aaKnown RBP17.64■□□□□ 0.42
SSBP3-205ENST00000417664 CLCNKBP51801 687 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 LMNB2Q03252 620 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 DRICH1Q6PGQ1 229 aaPredicted RBP17.64■□□□□ 0.42
SSBP3-205ENST00000417664 SPOCD1Q6ZMY3 1216 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 ZNF598Q86UK7 904 aaKnown RBP17.64■□□□□ 0.42
SSBP3-205ENST00000417664 ECHDC2Q86YB7 292 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 ATL2Q8NHH9 583 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 PKNOX2Q96KN3 472 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 FTHL17Q9BXU8 183 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 DCLK3Q9C098 648 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 RGS18Q9NS28 235 aa17.64■□□□□ 0.42
SSBP3-205ENST00000417664 GAS8O95995 478 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 PDGFRAP16234 1089 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 PTPN1P18031 435 aaKnown RBP17.64■□□□□ 0.41
SSBP3-205ENST00000417664 GJC1P36383 396 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 HSPA9P38646 679 aaKnown RBP17.64■□□□□ 0.41
SSBP3-205ENST00000417664 WSCD1Q658N2 575 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 TRAF7Q6Q0C0 670 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 SLC26A9Q7LBE3 791 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 OSTM1Q86WC4 334 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 ARFGAP1Q8N6T3 406 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 EMC1Q8N766 993 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 ZNF784Q8NCA9 323 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-205ENST00000417664 RNF25Q96BH1 459 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-205ENST00000417664 GDAP1L1Q96MZ0 367 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 TRIM51Q9BSJ1 452 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 DUSP16Q9BY84 665 aa17.64■□□□□ 0.41
SSBP3-205ENST00000417664 FRMD8P1Q9BZ68 369 aaPredicted RBP17.64■□□□□ 0.41
SSBP3-205ENST00000417664 OSBPL7Q9BZF2 842 aa17.64■□□□□ 0.41
Retrieved 100 of 20,778 RNA–protein pairs in 69.7 ms