RNA–Protein interactions for RNA: ENST00000417496.6

HDAC9-208, Transcript of histone deacetylase 9, humanhuman

TSL 2 BASIC

Gene HDAC9, Length 2,524 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HDAC9-208ENST00000417496 CHMP2BQ9UQN3 213 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 CEP83Q9Y592 693 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 RLFQ13129 1914 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 NFKBIEO00221 500 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 OGTO15294 1046 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 MAFO75444 373 aaPredicted RBP15.19■□□□□ 0.02
HDAC9-208ENST00000417496 MAP3K6O95382 1288 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 PRKCBP05771 671 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 GM2AP17900 193 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 ATP11AP98196 1134 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 CCDC15Q0P6D6 951 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 HSDL1Q3SXM5 330 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 EFHC2Q5JST6 749 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 TREML2Q5T2D2 321 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 EEF1DP3Q658K8 133 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 CEP128Q6ZU80 1094 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 MTDHQ86UE4 582 aaKnown RBP15.19■□□□□ 0.02
HDAC9-208ENST00000417496 PALM2Q8IXS6 379 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 SLC7A6OSQ96CW6 309 aaPredicted RBP15.19■□□□□ 0.02
HDAC9-208ENST00000417496 PPP1R16BQ96T49 567 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 GINM1Q9NU53 330 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 HOXC10Q9NYD6 342 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 NOP53Q9NZM5 478 aaKnown RBP15.19■□□□□ 0.02
HDAC9-208ENST00000417496 ZNF112Q9UJU3 913 aa15.19■□□□□ 0.02
HDAC9-208ENST00000417496 ABLIM1O14639 778 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 EPHB2P29323 1055 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 ARL4CP56559 192 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 TMEM132AQ24JP5 1023 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 RFX6Q8HWS3 928 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 NIPA2Q8N8Q9 360 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 RFWD2Q8NHY2 731 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 CNKSR2Q8WXI2 1034 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 SDCBP2Q9H190 292 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 VPS33BQ9H267 617 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 TXLNGQ9NUQ3 528 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 SLC24A2Q9UI40 661 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 SIGLEC16A6NMB1 481 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 INO80B-WBP1J3KQ70 363 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 CXCL8P10145 99 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 MIPP30301 263 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 ICAM3P32942 547 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 RFC5P40937 340 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 GCLCP48506 637 aaPredicted RBP15.18■□□□□ 0.02
HDAC9-208ENST00000417496 ZNF276Q8N554 614 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 LBHD1Q9BQE6 289 aaPredicted RBP15.18■□□□□ 0.02
HDAC9-208ENST00000417496 TBC1D10AQ9BXI6 508 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 INO80BQ9C086 356 aaPredicted RBP15.18■□□□□ 0.02
HDAC9-208ENST00000417496 ZNF518BQ9C0D4 1074 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 BTBD7Q9P203 1132 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 PCDHGC3Q9UN70 934 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 RGPD3A6NKT7 1758 aaPredicted RBP15.18■□□□□ 0.02
HDAC9-208ENST00000417496 RGPD4Q7Z3J3 1758 aa15.18■□□□□ 0.02
HDAC9-208ENST00000417496 SOWAHBA6NEL2 793 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 C2orf71A6NGG8 1288 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 ARIH2O95376 493 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 CDH5P33151 784 aaPredicted RBP15.17■□□□□ 0.02
HDAC9-208ENST00000417496 PTPN7P35236 360 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 EIF3EP60228 445 aaKnown RBP15.17■□□□□ 0.02
HDAC9-208ENST00000417496 SEPT7Q16181 437 aaKnown RBP15.17■□□□□ 0.02
HDAC9-208ENST00000417496 PPP1R2P3Q6NXS1 205 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 BBS12Q6ZW61 710 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 LRRC6Q86X45 466 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 ATP11CQ8NB49 1132 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 SPATA18Q8TC71 538 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 RSRC1Q96IZ7 334 aaKnown RBP15.17■□□□□ 0.02
HDAC9-208ENST00000417496 C12orf42Q96LP6 360 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 ASCC2Q9H1I8 757 aaPredicted RBP15.17■□□□□ 0.02
HDAC9-208ENST00000417496 SMYD3Q9H7B4 428 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 MINDY3Q9H8M7 445 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 SENP1Q9P0U3 644 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 ZMYND8Q9ULU4 1186 aaPredicted RBP15.17■□□□□ 0.02
HDAC9-208ENST00000417496 A0A0G2JND7 137 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 C19orf81C9J6K1 198 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 GRAP2O75791 330 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 IQCF3P0C7M6 154 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 RBP3P10745 1247 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 SKIV2L2P42285 1042 aaKnown RBP15.17■□□□□ 0.02
HDAC9-208ENST00000417496 RAD23BP54727 409 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 ADGRD1Q6QNK2 874 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 RGS9BPQ6ZS82 235 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 NLRP9Q7RTR0 991 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 POLNQ7Z5Q5 900 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 RPAINQ86UA6 219 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 LONP2Q86WA8 852 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 XYLT1Q86Y38 959 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 FAM13CQ8NE31 585 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 UBA3Q8TBC4 463 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 MZB1Q8WU39 189 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 DCAKDQ8WVC6 231 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 KLRG1Q96E93 195 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 LRMDAQ9H2I8 198 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 KANSL3Q9P2N6 904 aa15.17■□□□□ 0.02
HDAC9-208ENST00000417496 ZBTB42B2RXF5 422 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 H0Y3Z8 333 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 FAM155BO75949 473 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 KRT7P08729 469 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ATP2A2P16615 1042 aaKnown RBP15.16■□□□□ 0.02
HDAC9-208ENST00000417496 RXRBP28702 533 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ALDH3A1P30838 453 aa15.16■□□□□ 0.02
HDAC9-208ENST00000417496 ELK3P41970 407 aa15.16■□□□□ 0.02
Retrieved 100 of 20,778 RNA–protein pairs in 82.8 ms