RNA–Protein interactions for RNA: ENST00000417448.1

VCP-202, Transcript of valosin containing protein, humanhuman

TSL 3

Gene VCP, Length 722 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VCP-202ENST00000417448 SLC10A6Q3KNW5 377 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 NAIF1Q69YI7 327 aaPredicted RBP19.34■□□□□ 0.69
VCP-202ENST00000417448 APBB1IPQ7Z5R6 666 aaPredicted RBP19.34■□□□□ 0.69
VCP-202ENST00000417448 DNAJB7Q7Z6W7 309 aaPredicted RBP19.34■□□□□ 0.69
VCP-202ENST00000417448 DEFB124Q8NES8 71 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 ZNF507Q8TCN5 953 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 PSMG2Q969U7 264 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 COL26A1Q96A83 441 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 FAM83CQ9BQN1 747 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 CBWD1Q9BRT8 395 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 TMEM9BQ9NQ34 198 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 TUBGCP4Q9UGJ1 667 aa19.34■□□□□ 0.69
VCP-202ENST00000417448 PTPRDP23468 1912 aa19.33■□□□□ 0.69
VCP-202ENST00000417448 TNRC6BQ9UPQ9 1833 aaKnown RBP19.33■□□□□ 0.69
VCP-202ENST00000417448 LACTBL1A8MY62 500 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 TRDMT1O14717 391 aaKnown RBP19.33■□□□□ 0.68
VCP-202ENST00000417448 OGTO15294 1046 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 FAM189A1O60320 539 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 RHOBTB1O94844 696 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 OAZ2O95190 189 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 GRSF1Q12849 480 aaKnown RBP eCLIP19.33■□□□□ 0.68
VCP-202ENST00000417448 TRIM68Q6AZZ1 485 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 CENPPQ6IPU0 288 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 SMYD4Q8IYR2 804 aaPredicted RBP19.33■□□□□ 0.68
VCP-202ENST00000417448 FAM84AQ96KN4 292 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 LMBRD1Q9NUN5 540 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 KLK13Q9UKR3 277 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 AGO2Q9UKV8 859 aaKnown RBP19.33■□□□□ 0.68
VCP-202ENST00000417448 EXOC7Q9UPT5 735 aa19.33■□□□□ 0.68
VCP-202ENST00000417448 FLNBO75369 2602 aaKnown RBP19.33■□□□□ 0.68
VCP-202ENST00000417448 TGFB1I1O43294 461 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 WEE1P30291 646 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 YWHAHQ04917 246 aaPredicted RBP19.32■□□□□ 0.68
VCP-202ENST00000417448 ENOX2Q16206 610 aaKnown RBP19.32■□□□□ 0.68
VCP-202ENST00000417448 CAMK4Q16566 473 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 CRELD2Q6UXH1 353 aaPredicted RBP19.32■□□□□ 0.68
VCP-202ENST00000417448 CLEC17AQ6ZS10 378 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 EZH1Q92800 747 aaPredicted RBP19.32■□□□□ 0.68
VCP-202ENST00000417448 EBF3Q9H4W6 596 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 GKN1Q9NS71 199 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 INVSQ9Y283 1065 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 NEUROG3Q9Y4Z2 214 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 PCDHA5Q9Y5H7 936 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 STYXL1Q9Y6J8 313 aa19.32■□□□□ 0.68
VCP-202ENST00000417448 MTMR11A4FU01 709 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 M0QZQ0 153 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 EIF3DO15371 548 aaKnown RBP eCLIP19.31■□□□□ 0.68
VCP-202ENST00000417448 CLTAP09496 248 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 SCP2P22307 547 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 ALDH1A3P47895 512 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 GUCY2FP51841 1108 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 WNT7BP56706 349 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 GPR17Q13304 367 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 ALCAMQ13740 583 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 RUNX3Q13761 415 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 STXBP4Q6ZWJ1 553 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 ATAD1Q8NBU5 361 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 RIN3Q8TB24 985 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 TIGD1Q96MW7 591 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 FAM213AQ9BRX8 229 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 SLC46A2Q9BY10 475 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 TASP1Q9H6P5 420 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 IL21Q9HBE4 155 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 EBF1Q9UH73 591 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 CPSF3Q9UKF6 684 aaKnown RBP19.31■□□□□ 0.68
VCP-202ENST00000417448 CCL26Q9Y258 94 aa19.31■□□□□ 0.68
VCP-202ENST00000417448 PI4KAP42356 2102 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 KHNYNO15037 678 aaKnown RBP19.3■□□□□ 0.68
VCP-202ENST00000417448 RHOBTB3O94955 611 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 MYL1P05976 194 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 GBP1P32455 592 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 ABCD1P33897 745 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 IRX4P78413 519 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 UAP1L1Q3KQV9 507 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 ARHGAP15Q53QZ3 475 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 PMS2CLQ68D20 193 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 SLFN12LQ6IEE8 588 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 ARMCX5Q6P1M9 558 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 SYT13Q7L8C5 426 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 RPLP0P6Q8NHW5 317 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 LPIN3Q9BQK8 851 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 TMEM206Q9H813 350 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 RPF1Q9H9Y2 349 aaKnown RBP19.3■□□□□ 0.68
VCP-202ENST00000417448 MSRB2Q9Y3D2 182 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 ASB3Q9Y575 518 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 SCN1AP35498 2009 aa19.3■□□□□ 0.68
VCP-202ENST00000417448 HELZ2Q9BYK8 2649 aaKnown RBP19.29■□□□□ 0.68
VCP-202ENST00000417448 TTC26A0AVF1 554 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 BIN1O00499 593 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 APBB3O95704 486 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 CAPNS1P04632 268 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 ARSAP15289 507 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 BCKDHBP21953 392 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 GALK1P51570 392 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 CYP2J2P51589 502 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 PSMD2Q13200 908 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 SOWAHCQ53LP3 525 aaPredicted RBP19.29■□□□□ 0.68
VCP-202ENST00000417448 RDH13Q8NBN7 331 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 SMARCE1Q969G3 411 aa19.29■□□□□ 0.68
VCP-202ENST00000417448 ASH1LQ9NR48 2969 aaKnown RBP19.29■□□□□ 0.68
Retrieved 100 of 20,778 RNA–protein pairs in 16.8 ms