RNA–Protein interactions for RNA: ENST00000417101.1

ACTB-203, Transcript of actin beta, humanhuman

TSL 4

Gene ACTB, Length 472 nt, Biotype protein coding, Subcellular localisation Cell leading edge, Cytoplasm, Cytosol, Exosome, Lamellipodium, Mitochondria, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ACTB-203ENST00000417101 TRAV19A0A0A6YYK7 116 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 MED19A0JLT2 244 aaPredicted RBP23.31■■□□□ 1.32
ACTB-203ENST00000417101 ZSCAN22P10073 491 aaPredicted RBP23.31■■□□□ 1.32
ACTB-203ENST00000417101 WARSP23381 471 aaKnown RBP23.31■■□□□ 1.32
ACTB-203ENST00000417101 BDNFP23560 247 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 LMNB2Q03252 620 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 FAM160A1Q05DH4 1040 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 SPEM2Q0P670 501 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 GRSF1Q12849 480 aaKnown RBP eCLIP23.31■■□□□ 1.326e-7■□□□□ 10
ACTB-203ENST00000417101 PDGFRLQ15198 375 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 FSTL4Q6MZW2 842 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 PKN3Q6P5Z2 889 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 CCDC127Q96BQ5 260 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 FNBP1Q96RU3 617 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 MAGEF1Q9HAY2 307 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 NCOR2Q9Y618 2525 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 UBE4BO95155 1302 aa23.31■■□□□ 1.32
ACTB-203ENST00000417101 OBSL1O75147 1896 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 TRDMT1O14717 391 aaKnown RBP23.3■■□□□ 1.32
ACTB-203ENST00000417101 CST3P01034 146 aaPredicted RBP23.3■■□□□ 1.32
ACTB-203ENST00000417101 USP17L7P0C7H9 530 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 CNR2P34972 360 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 ME1P48163 572 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 AMPD2Q01433 879 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 CYP27A1Q02318 531 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 CYP24A1Q07973 514 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 EHHADHQ08426 723 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 MTF1Q14872 753 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 PSMD6Q15008 389 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 MAPRE1Q15691 268 aaKnown RBP23.3■■□□□ 1.32
ACTB-203ENST00000417101 VSTM1Q6UX27 236 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 HS2ST1Q7LGA3 356 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 FSIP1Q8NA03 581 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 XXYLT1Q8NBI6 393 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 CGRRF1Q99675 332 aa23.3■■□□□ 1.32
ACTB-203ENST00000417101 ZNF638Q14966 1978 aaKnown RBP23.3■■□□□ 1.32
ACTB-203ENST00000417101 C2orf78A6NCI8 922 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 PRR5-ARHGAP8B1AHC4 643 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 F13A1P00488 732 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 HSP90AA1P07900 732 aaKnown RBP23.29■■□□□ 1.32
ACTB-203ENST00000417101 RETP07949 1114 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 HOXA6P31267 233 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 GRIK1P39086 918 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 SNRPFP62306 86 aaKnown RBP23.29■■□□□ 1.32
ACTB-203ENST00000417101 ARHGAP8P85298 464 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 ZNF77Q15935 545 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 ARL14EPQ8N8R7 260 aaPredicted RBP23.29■■□□□ 1.32
ACTB-203ENST00000417101 SPATA17Q96L03 361 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 MRPL45Q9BRJ2 306 aaKnown RBP23.29■■□□□ 1.32
ACTB-203ENST00000417101 SNX25Q9H3E2 840 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 FBRSL1Q9HCM7 1045 aaKnown RBP23.29■■□□□ 1.32
ACTB-203ENST00000417101 SLC39A2Q9NP94 309 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 DUS2Q9NX74 493 aaKnown RBP23.29■■□□□ 1.32
ACTB-203ENST00000417101 FAM13BQ9NYF5 915 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 GCNT4Q9P109 453 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 PCDHA7Q9UN72 937 aa23.29■■□□□ 1.32
ACTB-203ENST00000417101 EGFP01133 1207 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 SDHBP21912 280 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 GNL1P36915 607 aaPredicted RBP23.28■■□□□ 1.32
ACTB-203ENST00000417101 AFMP43652 599 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 USP4Q13107 963 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 KCNB1Q14721 858 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 MDH1BQ5I0G3 518 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 NAIF1Q69YI7 327 aaPredicted RBP23.28■■□□□ 1.32
ACTB-203ENST00000417101 CEP68Q76N32 757 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 ARHGAP30Q7Z6I6 1101 aaPredicted RBP23.28■■□□□ 1.32
ACTB-203ENST00000417101 HSCBQ8IWL3 235 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 CPA6Q8N4T0 437 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 MYCBPAPQ8TBZ2 947 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 OSCP1Q8WVF1 389 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 PCED1BQ96HM7 432 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 ECT2Q9H8V3 914 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 CDV3Q9UKY7 258 aaKnown RBP23.28■■□□□ 1.32
ACTB-203ENST00000417101 WNT6Q9Y6F9 365 aa23.28■■□□□ 1.32
ACTB-203ENST00000417101 PDIA4P13667 645 aaKnown RBP23.27■■□□□ 1.32
ACTB-203ENST00000417101 HDCP19113 662 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 ANXA13P27216 316 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 GJA4P35212 333 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 IFNAR2P48551 515 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 PXNP49023 591 aaPredicted RBP23.27■■□□□ 1.32
ACTB-203ENST00000417101 GALK1P51570 392 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 USP46P62068 366 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 TNNC1P63316 161 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 CUL4BQ13620 913 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 WDR72Q3MJ13 1102 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 RESP18Q5W5W9 173 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 DENND5BQ6ZUT9 1274 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 WDR5BQ86VZ2 330 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 OR6B3Q8NGW1 331 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 SH3RF2Q8TEC5 729 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 ZNF516Q92618 1163 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 P2RY13Q9BPV8 354 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 GZF1Q9H116 711 aaPredicted RBP23.27■■□□□ 1.32
ACTB-203ENST00000417101 NME7Q9Y5B8 376 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 SPTBN2O15020 2390 aa23.27■■□□□ 1.32
ACTB-203ENST00000417101 PVALEFA0A1B0GWK0 134 aa23.26■■□□□ 1.31
ACTB-203ENST00000417101 ATG13O75143 517 aa23.26■■□□□ 1.31
ACTB-203ENST00000417101 RNF40O75150 1001 aa23.26■■□□□ 1.31
ACTB-203ENST00000417101 TACC1O75410 805 aa23.26■■□□□ 1.31
ACTB-203ENST00000417101 DRD1P21728 446 aa23.26■■□□□ 1.31
Retrieved 100 of 20,778 RNA–protein pairs in 38.7 ms