RNA–Protein interactions for RNA: ENST00000417088.2

RPS28-201, Transcript of ribosomal protein S28, humanhuman

TSL 2

Gene RPS28, Length 334 nt, Biotype retained intron, Subcellular localisation Cytoplasm, Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPS28-201ENST00000417088 ZSCAN16Q9H4T2 348 aaPredicted RBP15.87■□□□□ 0.13
RPS28-201ENST00000417088 CRTAC1Q9NQ79 661 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 KBTBD4Q9NVX7 518 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 DUS2Q9NX74 493 aaKnown RBP15.87■□□□□ 0.13
RPS28-201ENST00000417088 CDH9Q9ULB4 789 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 R3HCC1Q9Y3T6 440 aaKnown RBP15.87■□□□□ 0.13
RPS28-201ENST00000417088 WNT6Q9Y6F9 365 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 RALGAPA1Q6GYQ0 2036 aa15.87■□□□□ 0.13
RPS28-201ENST00000417088 CNOT1A5YKK6 2376 aaKnown RBP15.86■□□□□ 0.13
RPS28-201ENST00000417088 C2orf78A6NCI8 922 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 AXIN1O15169 862 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 FOXD2O60548 495 aaPredicted RBP15.86■□□□□ 0.13
RPS28-201ENST00000417088 RPP40O75818 363 aaKnown RBP15.86■□□□□ 0.13
RPS28-201ENST00000417088 CKMP06732 381 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 PSMC1P62191 440 aaKnown RBP15.86■□□□□ 0.13
RPS28-201ENST00000417088 SURF1Q15526 300 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 E2F4Q16254 413 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 C4orf50Q6ZRC1 276 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 STXBP4Q6ZWJ1 553 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 CACNA2D4Q7Z3S7 1137 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 TTC16Q8NEE8 873 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 EZH1Q92800 747 aaPredicted RBP15.86■□□□□ 0.13
RPS28-201ENST00000417088 MYLPFQ96A32 169 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 LOXL4Q96JB6 756 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 SPATA17Q96L03 361 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 CNTNAP3BQ96NU0 1288 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 CNTNAP3Q9BZ76 1288 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 TRIM9Q9C026 710 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 TNMDQ9H2S6 317 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 FOXD4L1Q9NU39 408 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 HSPBP1Q9NZL4 362 aa15.86■□□□□ 0.13
RPS28-201ENST00000417088 MAGEC2Q9UBF1 373 aaPredicted RBP15.86■□□□□ 0.13
RPS28-201ENST00000417088 CACNA1BQ00975 2339 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 SPAG17Q6Q759 2223 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 STX6O43752 255 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 PDGFRBP09619 1106 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 HDCP19113 662 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 WARSP23381 471 aaKnown RBP15.85■□□□□ 0.13
RPS28-201ENST00000417088 BDNFP23560 247 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 RAP1GAPP47736 663 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 IFNAR2P48551 515 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 STK38Q15208 465 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 EML3Q32P44 896 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 FBXO43Q4G163 708 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 PPM1JQ5JR12 505 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 VSTM1Q6UX27 236 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 EPM2AIP1Q7L775 607 aaPredicted RBP15.85■□□□□ 0.13
RPS28-201ENST00000417088 TRAPPC11Q7Z392 1133 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 KBTBD6Q86V97 674 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 WDR49Q8IV35 697 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 CAMKK1Q8N5S9 505 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 FSIP1Q8NA03 581 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 ZNF507Q8TCN5 953 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 SH3RF2Q8TEC5 729 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 ATP2A3Q93084 1043 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 LRRC27Q9C0I9 530 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 ARRDC1-AS1Q9H2J1 176 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 LINC00597Q9H2U6 94 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 KIAA1586Q9HCI6 787 aa15.85■□□□□ 0.13
RPS28-201ENST00000417088 SPTLC2O15270 562 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 EIF3DO15371 548 aaKnown RBP eCLIP15.84■□□□□ 0.13
RPS28-201ENST00000417088 AKAP3O75969 853 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 EPN2O95208 641 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 CST3P01034 146 aaPredicted RBP15.84■□□□□ 0.13
RPS28-201ENST00000417088 ADRB1P08588 477 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 CCDC192P0DO97 292 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 TCF3P15923 654 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 KCNB1Q14721 858 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 SF3A2Q15428 464 aaKnown RBP15.84■□□□□ 0.13
RPS28-201ENST00000417088 MAPRE1Q15691 268 aaKnown RBP15.84■□□□□ 0.13
RPS28-201ENST00000417088 CCDC6Q16204 474 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 RPLP0P6Q8NHW5 317 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 CD101Q93033 1021 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 EXOC4Q96A65 974 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 HHIPQ96QV1 700 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 MMS19Q96T76 1030 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 CUEDC2Q9H467 287 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 AGPAT3Q9NRZ7 376 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 TFIP11Q9UBB9 837 aaKnown RBP15.84■□□□□ 0.13
RPS28-201ENST00000417088 ARHGAP26Q9UNA1 814 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 NME7Q9Y5B8 376 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 ANAPC1Q9H1A4 1944 aa15.84■□□□□ 0.13
RPS28-201ENST00000417088 TGFB1I1O43294 461 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 PPP6R2O75170 966 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 ZNF806P0C7X5 589 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 GRIK1P39086 918 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 USP46P62068 366 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 ASIC1P78348 528 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 ZXDBP98169 803 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 CYP27A1Q02318 531 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 SNRNP35Q16560 246 aaKnown RBP15.83■□□□□ 0.12
RPS28-201ENST00000417088 CNNM4Q6P4Q7 775 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 SYT13Q7L8C5 426 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 RDH13Q8NBN7 331 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 MYCBPAPQ8TBZ2 947 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 DHX58Q96C10 678 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 PCED1BQ96HM7 432 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 ZC3H10Q96K80 434 aaKnown RBP15.83■□□□□ 0.12
RPS28-201ENST00000417088 CEP295NLQ96MC4 621 aa15.83■□□□□ 0.12
RPS28-201ENST00000417088 MRPL45Q9BRJ2 306 aaKnown RBP15.83■□□□□ 0.12
Retrieved 100 of 20,778 RNA–protein pairs in 20 ms