RNA–Protein interactions for RNA: ENST00000417043.5

RHBDF1-202, Transcript of rhomboid 5 homolog 1, humanhuman

TSL 3

Gene RHBDF1, Length 816 nt, Biotype nonsense mediated decay, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RHBDF1-202ENST00000417043 SURF1Q15526 300 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 SNRNP35Q16560 246 aaKnown RBP16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 FAM26FQ5R3K3 315 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 DPH6Q7L8W6 267 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 WDR49Q8IV35 697 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 SYNPOQ8N3V7 929 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 ARL14EPQ8N8R7 260 aaPredicted RBP16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 IQUBQ8NA54 791 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 SPATA18Q8TC71 538 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 SCFD1Q8WVM8 642 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 C7orf25Q9BPX7 421 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 CUEDC2Q9H467 287 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 KIF9Q9HAQ2 790 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 AGPAT3Q9NRZ7 376 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 MAGEC2Q9UBF1 373 aaPredicted RBP16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 WNT6Q9Y6F9 365 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 SPAG17Q6Q759 2223 aa16.69■□□□□ 0.26
RHBDF1-202ENST00000417043 EML5Q05BV3 1969 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 DCDC2BA2VCK2 349 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 TRDMT1O14717 391 aaKnown RBP16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 EIF3DO15371 548 aaKnown RBP eCLIP16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 YEATS4O95619 227 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 CKMP06732 381 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 RETP07949 1114 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 TNNI1P19237 187 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 WARSP23381 471 aaKnown RBP16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 GRIK1P39086 918 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 MAGEA11P43364 429 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 AMPD3Q01432 767 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 CYP27A1Q02318 531 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 FAM160A1Q05DH4 1040 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 GRSF1Q12849 480 aaKnown RBP eCLIP16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 ZNF268Q14587 947 aaPredicted RBP16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 MTF1Q14872 753 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 ZNF516Q92618 1163 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 FUBP3Q96I24 572 aaKnown RBP eCLIP16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 LINC00597Q9H2U6 94 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 SLC39A2Q9NP94 309 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 DUS2Q9NX74 493 aaKnown RBP16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 GCNT4Q9P109 453 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 CDH9Q9ULB4 789 aa16.68■□□□□ 0.26
RHBDF1-202ENST00000417043 TRAV19A0A0A6YYK7 116 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 SOBPA7XYQ1 873 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 RNF40O75150 1001 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 USP17L7P0C7H9 530 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 GJA4P35212 333 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 GNL1P36915 607 aaPredicted RBP16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 AFMP43652 599 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 ZXDBP98169 803 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 LMNB2Q03252 620 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 CYP24A1Q07973 514 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 EHHADHQ08426 723 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 CUL4BQ13620 913 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 ZNF77Q15935 545 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 MDH1BQ5I0G3 518 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 CNNM4Q6P4Q7 775 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 C4orf50Q6ZRC1 276 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 CEP68Q76N32 757 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 ARHGAP30Q7Z6I6 1101 aaPredicted RBP16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 WDR5BQ86VZ2 330 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 GRAMD1CQ8IYS0 662 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 FAM160A2Q8N612 972 aaPredicted RBP16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 OSCP1Q8WVF1 389 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 EZH1Q92800 747 aaPredicted RBP16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 PCED1BQ96HM7 432 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 GZF1Q9H116 711 aaPredicted RBP16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 DPEP3Q9H4B8 488 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 ECT2Q9H8V3 914 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 KIAA1586Q9HCI6 787 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 CDV3Q9UKY7 258 aaKnown RBP16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 PCDHA7Q9UN72 937 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 MYO16Q9Y6X6 1858 aa16.67■□□□□ 0.26
RHBDF1-202ENST00000417043 MYOFQ9NZM1 2061 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 PRR5-ARHGAP8B1AHC4 643 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 HDCP19113 662 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 CNR2P34972 360 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 CASP4P49662 377 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 CACNA2D1P54289 1103 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 ARHGAP8P85298 464 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 PKP1Q13835 747 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 PSMD6Q15008 389 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 PDGFRLQ15198 375 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 EML3Q32P44 896 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 UNC13DQ70J99 1090 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 HS2ST1Q7LGA3 356 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 XXYLT1Q8NBI6 393 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 SPRYD3Q8NCJ5 442 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 OR6B3Q8NGW1 331 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 MYCBPAPQ8TBZ2 947 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 SH3RF2Q8TEC5 729 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 ELMO3Q96BJ8 720 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 FNBP1Q96RU3 617 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 CGRRF1Q99675 332 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 P2RY13Q9BPV8 354 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 SNX25Q9H3E2 840 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 SEMA4GQ9NTN9 838 aa16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 HELZP42694 1942 aaKnown RBP16.66■□□□□ 0.26
RHBDF1-202ENST00000417043 LOC105378220A0A1B0GUY1 285 aaPredicted RBP16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 ANTXRLA6NF34 631 aa16.65■□□□□ 0.26
RHBDF1-202ENST00000417043 AXIN1O15169 862 aa16.65■□□□□ 0.26
Retrieved 100 of 20,778 RNA–protein pairs in 25.9 ms