RNA–Protein interactions for RNA: ENST00000416728.3

PAF1-202, Transcript of PAF1 homolog, Paf1/RNA polymerase II complex component, humanhuman

TSL 2

Gene PAF1, Length 1,383 nt, Biotype nonsense mediated decay, Subcellular localisation Cytosol .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PAF1-202ENST00000416728 ZNF396Q96N95 335 aaPredicted RBP15.45■□□□□ 0.06
PAF1-202ENST00000416728 SLC22A12Q96S37 553 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 CYP2S1Q96SQ9 504 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 P2RY13Q9BPV8 354 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 DUS2Q9NX74 493 aaKnown RBP15.45■□□□□ 0.06
PAF1-202ENST00000416728 MAGEC2Q9UBF1 373 aaPredicted RBP15.45■□□□□ 0.06
PAF1-202ENST00000416728 NCOR2Q9Y618 2525 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 TCHHQ07283 1943 aa15.45■□□□□ 0.06
PAF1-202ENST00000416728 CCDC163A0A0D9SF12 145 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 PPP6R2O75170 966 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 EGFP01133 1207 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 LMO2P25791 158 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 GJA4P35212 333 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 PXNP49023 591 aaPredicted RBP15.44■□□□□ 0.06
PAF1-202ENST00000416728 GALK1P51570 392 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 USP4Q13107 963 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 KCNB1Q14721 858 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 FBXO43Q4G163 708 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 FAM26FQ5R3K3 315 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 LIMS2Q7Z4I7 341 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 ARL14EPQ8N8R7 260 aaPredicted RBP15.44■□□□□ 0.06
PAF1-202ENST00000416728 OSCP1Q8WVF1 389 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 GAB3Q8WWW8 586 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 ATP2A3Q93084 1043 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 MMS19Q96T76 1030 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 ECT2Q9H8V3 914 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 FBRSL1Q9HCM7 1045 aaKnown RBP15.44■□□□□ 0.06
PAF1-202ENST00000416728 WNT6Q9Y6F9 365 aa15.44■□□□□ 0.06
PAF1-202ENST00000416728 C2orf78A6NCI8 922 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 SLC30A4O14863 429 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 RPP40O75818 363 aaKnown RBP15.43■□□□□ 0.06
PAF1-202ENST00000416728 CCDC192P0DO97 292 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 DLATP10515 647 aaKnown RBP15.43■□□□□ 0.06
PAF1-202ENST00000416728 WARSP23381 471 aaKnown RBP15.43■□□□□ 0.06
PAF1-202ENST00000416728 BDNFP23560 247 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 ANXA13P27216 316 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 HOXD13P35453 343 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 GRIK1P39086 918 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 PDE6CP51160 858 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 CYP27A1Q02318 531 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 SNRNP35Q16560 246 aaKnown RBP15.43■□□□□ 0.06
PAF1-202ENST00000416728 EPM2AIP1Q7L775 607 aaPredicted RBP15.43■□□□□ 0.06
PAF1-202ENST00000416728 TRAPPC11Q7Z392 1133 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 IQUBQ8NA54 791 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 RDH13Q8NBN7 331 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 ZNF507Q8TCN5 953 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 SH3RF2Q8TEC5 729 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 SPATA17Q96L03 361 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 CEP295NLQ96MC4 621 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 FNBP1Q96RU3 617 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 CRTAC1Q9NQ79 661 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 AGPAT3Q9NRZ7 376 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 GCNT4Q9P109 453 aa15.43■□□□□ 0.06
PAF1-202ENST00000416728 TFIP11Q9UBB9 837 aaKnown RBP15.43■□□□□ 0.06
PAF1-202ENST00000416728 CUTAO60888 179 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 YEATS4O95619 227 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 PDGFRBP09619 1106 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 HDCP19113 662 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 TNNI1P19237 187 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 NR1H3Q13133 447 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 NAIF1Q69YI7 327 aaPredicted RBP15.42■□□□□ 0.06
PAF1-202ENST00000416728 CNNM4Q6P4Q7 775 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 DENND5BQ6ZUT9 1274 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 CACNA2D4Q7Z3S7 1137 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 CAMKK1Q8N5S9 505 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 CD101Q93033 1021 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 PCED1BQ96HM7 432 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 LOXL4Q96JB6 756 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 SNX25Q9H3E2 840 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 EHD2Q9NZN4 543 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 ARHGAP26Q9UNA1 814 aa15.42■□□□□ 0.06
PAF1-202ENST00000416728 KIF26AQ9ULI4 1882 aaPredicted RBP15.42■□□□□ 0.06
PAF1-202ENST00000416728 TRIM66O15016 1216 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 AXIN1O15169 862 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 TGFB1I1O43294 461 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 TCF3P15923 654 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 CYP2J2P51589 502 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 PSMD6Q15008 389 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 EML3Q32P44 896 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 MDH1BQ5I0G3 518 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 SHC4Q6S5L8 630 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 HS2ST1Q7LGA3 356 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 NELFCDQ8IXH7 590 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 XXYLT1Q8NBI6 393 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 RPLP0P6Q8NHW5 317 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 MYCBPAPQ8TBZ2 947 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 CCDC127Q96BQ5 260 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 HHIPQ96QV1 700 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 CGRRF1Q99675 332 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 C7orf25Q9BPX7 421 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 MAGEF1Q9HAY2 307 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 POLR3BQ9NW08 1133 aaPredicted RBP15.41■□□□□ 0.06
PAF1-202ENST00000416728 TRPM5Q9NZQ8 1165 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 UBE4BO95155 1302 aa15.41■□□□□ 0.06
PAF1-202ENST00000416728 CLIC2O15247 247 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 GDF9O60383 454 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 TACC1O75410 805 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 AKAP3O75969 853 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 NFATC1O95644 943 aa15.4■□□□□ 0.06
PAF1-202ENST00000416728 CST3P01034 146 aaPredicted RBP15.4■□□□□ 0.06
Retrieved 100 of 20,778 RNA–protein pairs in 30.9 ms