RNA–Protein interactions for RNA: ENST00000415537.1

HLA-C-204, Transcript of major histocompatibility complex, class I, C, humanhuman

Gene HLA-C, Length 782 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HLA-C-204ENST00000415537 FRMD4BQ9Y2L6 1034 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 PTPRDP23468 1912 aa26.68■■□□□ 1.86
HLA-C-204ENST00000415537 DMDP11532 3685 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 LRRIQ3A6PVS8 624 aaPredicted RBP26.67■■□□□ 1.86
HLA-C-204ENST00000415537 SPECC1L-ADORA2AF8WAN1 911 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 PRR29P0C7W0 189 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 SOX9P48436 509 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 MTAPQ13126 283 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 MDH1BQ5I0G3 518 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 PLEKHO2Q8TD55 490 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 CCDC34Q96HJ3 373 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 PCED1BQ96HM7 432 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 SPATA17Q96L03 361 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 CHRDQ9H2X0 955 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 TRPC7Q9HCX4 862 aa26.67■■□□□ 1.86
HLA-C-204ENST00000415537 A8MXQ7 604 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 TRIM66O15016 1216 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 KINO60870 393 aaKnown RBP26.66■■□□□ 1.86
HLA-C-204ENST00000415537 RHOBTB3O94955 611 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 LRRC32Q14392 662 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 PPP2R5DQ14738 602 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 ZNF699Q32M78 642 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 TDRD10Q5VZ19 366 aaKnown RBP26.66■■□□□ 1.86
HLA-C-204ENST00000415537 CEP135Q66GS9 1140 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 CC2D1AQ6P1N0 951 aaPredicted RBP26.66■■□□□ 1.86
HLA-C-204ENST00000415537 KRBA2Q6ZNG9 492 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 USP13Q92995 863 aaPredicted RBP26.66■■□□□ 1.86
HLA-C-204ENST00000415537 CEP295NLQ96MC4 621 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 XYLT2Q9H1B5 865 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 GDPD2Q9HCC8 539 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 GKN1Q9NS71 199 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 CCL26Q9Y258 94 aa26.66■■□□□ 1.86
HLA-C-204ENST00000415537 ANAPC1Q9H1A4 1944 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 ZNF202O95125 648 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 CHRNB1P11230 501 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 PTPN1P18031 435 aaKnown RBP26.65■■□□□ 1.86
HLA-C-204ENST00000415537 CTHP32929 405 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 CLDN10P78369 228 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 TNK2Q07912 1038 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 DPYDQ12882 1025 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 NCOA4Q13772 614 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 ITPRIPL2Q3MIP1 535 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 ZNF667Q5HYK9 610 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 ATRIPQ8WXE1 791 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 EHD2Q9NZN4 543 aa26.65■■□□□ 1.86
HLA-C-204ENST00000415537 TRAV19A0A0A6YYK7 116 aa26.64■■□□□ 1.86
HLA-C-204ENST00000415537 TADA3O75528 432 aa26.64■■□□□ 1.86
HLA-C-204ENST00000415537 C4BPAP04003 597 aaKnown RBP26.64■■□□□ 1.86
HLA-C-204ENST00000415537 USP17L7P0C7H9 530 aa26.64■■□□□ 1.86
HLA-C-204ENST00000415537 ZNF268Q14587 947 aaPredicted RBP26.64■■□□□ 1.86
HLA-C-204ENST00000415537 DENND5BQ6ZUT9 1274 aa26.64■■□□□ 1.86
HLA-C-204ENST00000415537 GOLPH3LQ9H4A5 285 aa26.64■■□□□ 1.86
HLA-C-204ENST00000415537 VRTNQ9H8Y1 702 aa26.64■■□□□ 1.86
HLA-C-204ENST00000415537 PRMT8Q9NR22 394 aaPredicted RBP26.64■■□□□ 1.86
HLA-C-204ENST00000415537 TRAF3IP3Q9Y228 551 aa26.64■■□□□ 1.86
HLA-C-204ENST00000415537 PCDHGA2Q9Y5H1 932 aa26.64■■□□□ 1.86
HLA-C-204ENST00000415537 CKMP06732 381 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 CCR3P51677 355 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 TSSK4Q6SA08 328 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 B3GALNT2Q8NCR0 500 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 TMC2Q8TDI7 906 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 DPEP3Q9H4B8 488 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 ZSCAN32Q9NX65 697 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 MAPK8IP1Q9UQF2 711 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 NME7Q9Y5B8 376 aa26.63■■□□□ 1.85
HLA-C-204ENST00000415537 P4HA1P13674 534 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 DLG4P78352 724 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 FAM160A1Q05DH4 1040 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 RUNX3Q13761 415 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 KCNB1Q14721 858 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 PON2Q15165 354 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 SGSM1Q2NKQ1 1148 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 DGKKQ5KSL6 1271 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 TXNDC11Q6PKC3 985 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 MAMSTRQ6ZN01 415 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 TTC16Q8NEE8 873 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 CYP2S1Q96SQ9 504 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 FAM83CQ9BQN1 747 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 ELOVL4Q9GZR5 314 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 SMYD3Q9H7B4 428 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 TRPM5Q9NZQ8 1165 aa26.62■■□□□ 1.85
HLA-C-204ENST00000415537 PTPRZ1P23471 2315 aaPredicted RBP26.61■■□□□ 1.85
HLA-C-204ENST00000415537 GOLGA6L4A6NEF3 574 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 F8VP50 259 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 IKBKBO14920 756 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 NR2F2P24468 414 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 PDE6CP51160 858 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 NRLP54845 237 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 CDH8P55286 799 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 SCARA5Q6ZMJ2 495 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 ARL14EPQ8N8R7 260 aaPredicted RBP26.61■■□□□ 1.85
HLA-C-204ENST00000415537 C8orf48Q96LL4 319 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 HINFPQ9BQA5 517 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 FAM126AQ9BYI3 521 aaPredicted RBP26.61■■□□□ 1.85
HLA-C-204ENST00000415537 EBF3Q9H4W6 596 aa26.61■■□□□ 1.85
HLA-C-204ENST00000415537 FAM186AA6NE01 2351 aa26.6■■□□□ 1.85
HLA-C-204ENST00000415537 VNN1O95497 513 aa26.6■■□□□ 1.85
HLA-C-204ENST00000415537 HDCP19113 662 aa26.6■■□□□ 1.85
HLA-C-204ENST00000415537 RPL13P26373 211 aaKnown RBP26.6■■□□□ 1.85
HLA-C-204ENST00000415537 AMPD2Q01433 879 aa26.6■■□□□ 1.85
Retrieved 100 of 20,778 RNA–protein pairs in 30.6 ms