RNA–Protein interactions for RNA: ENST00000415107.5

ATG4B-207, Transcript of autophagy related 4B cysteine peptidase, humanhuman

TSL 5

Gene ATG4B, Length 356 nt, Biotype nonsense mediated decay, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
ATG4B-207ENST00000415107 MGAT5BQ3V5L5 792 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 PKDCCQ504Y2 493 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 ATAT1Q5SQI0 421 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 PPP1R26Q5T8A7 1209 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-207ENST00000415107 GJB7Q6PEY0 223 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 LCLAT1Q6UWP7 414 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 CLEC20AQ6ZU45 233 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 SPATA31D4Q6ZUB0 917 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 GAS2L3Q86XJ1 694 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 ELMOD1Q8N336 334 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 C12orf29Q8N999 325 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 ANKRD52Q8NB46 1076 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 RNF214Q8ND24 703 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 GADD45GIP1Q8TAE8 222 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-207ENST00000415107 NUP58Q9BVL2 599 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 TTLL2Q9BWV7 592 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 LRRC3Q9BY71 257 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 RBSNQ9H1K0 784 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 FAM207AQ9NSI2 230 aaPredicted RBP12.64□□□□□ -0.39
ATG4B-207ENST00000415107 COMMD8Q9NX08 183 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 IL37Q9NZH6 218 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 EHD2Q9NZN4 543 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 ZMYM5Q9UJ78 669 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 WDR3Q9UNX4 943 aaKnown RBP eCLIP12.64□□□□□ -0.39
ATG4B-207ENST00000415107 USTQ9Y2C2 406 aa12.64□□□□□ -0.39
ATG4B-207ENST00000415107 NCANO14594 1321 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 GREB1Q4ZG55 1949 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 A0A1W2PQJ5 194 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 GRXCR2A6NFK2 248 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 SOBPA7XYQ1 873 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 H3BQ06 376 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 FOXN3O00409 490 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 FGF19O95750 216 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 FAM200BP0CF97 657 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 SETSIPP0DME0 302 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 CCDC130P13994 396 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 KLK7P49862 253 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 BCAT1P54687 386 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 CBX2Q14781 532 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 ZNF394Q53GI3 561 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 RARS2Q5T160 578 aaKnown RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 TMC5Q6UXY8 1006 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 TMC8Q8IU68 726 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 ZMIZ2Q8NF64 920 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 PPM1EQ8WY54 764 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 SMG7Q92540 1137 aaKnown RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 HEXIM2Q96MH2 286 aaKnown RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 SEPT5Q99719 369 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 DUSP16Q9BY84 665 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 XPO4Q9C0E2 1151 aaKnown RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 KRT82Q9NSB4 513 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 TMEM30AQ9NV96 361 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 IFNKQ9P0W0 207 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 UXTQ9UBK9 157 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 PRKAG3Q9UGI9 489 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 TSPAN16Q9UKR8 245 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 PCDHGC3Q9UN70 934 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 SLC27A5Q9Y2P5 690 aa12.63□□□□□ -0.39
ATG4B-207ENST00000415107 USP15Q9Y4E8 981 aaPredicted RBP12.63□□□□□ -0.39
ATG4B-207ENST00000415107 CLUHO75153 1309 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 NOTCH4Q99466 2003 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 SPDYE4A6NLX3 237 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 F8VP50 259 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 TNFRSF10BO14763 440 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 MED7O43513 233 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 AP1G2O75843 785 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 HMGA1P17096 107 aaKnown RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 PTPN2P17706 415 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 ANXA13P27216 316 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 GNA15P30679 374 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 CLCN1P35523 988 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 SOX5P35711 763 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 GRIK1P39086 918 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 PLA2G4AP47712 749 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 RPL34P49207 117 aaKnown RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 POLR2FP61218 127 aaKnown RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 PTK2Q05397 1052 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 BST2Q10589 180 aaKnown RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 ORC1Q13415 861 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 ARHGAP44Q17R89 818 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 PRSS36Q5K4E3 855 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 DENND5BQ6ZUT9 1274 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 DNAJB7Q7Z6W7 309 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 TTC30AQ86WT1 665 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 ZNF677Q86XU0 584 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 C12orf76Q8N812 135 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 OVCA2Q8WZ82 227 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 TFAP2BQ92481 460 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 BAP1Q92560 729 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 ZNF512Q96ME7 567 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 SMOQ99835 787 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 ZSWIM1Q9BR11 485 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 NUCKS1Q9H1E3 243 aaKnown RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 CYLDQ9NQC7 956 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 ASAH2Q9NR71 780 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 FAM49BQ9NUQ9 324 aa12.62□□□□□ -0.39
ATG4B-207ENST00000415107 DNMT3BQ9UBC3 853 aaKnown RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 ZFP37Q9Y6Q3 630 aaPredicted RBP12.62□□□□□ -0.39
ATG4B-207ENST00000415107 HHLA1C9JL84 531 aa12.61□□□□□ -0.39
ATG4B-207ENST00000415107 CLDN5O00501 218 aa12.61□□□□□ -0.39
Retrieved 100 of 20,778 RNA–protein pairs in 23.4 ms