RNA–Protein interactions for RNA: ENST00000414802.5

CNOT4-204, Transcript of CCR4-NOT transcription complex subunit 4, humanhuman

TSL 1 (best) BASIC

Gene CNOT4, Length 1,687 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CNOT4-204ENST00000414802 SOWAHDA6NJG2 315 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 TULP2O00295 520 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 MED7O43513 233 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 TGM5O43548 720 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 CLASP2O75122 1294 aaKnown RBP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 BEST1O76090 585 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 FAM200BP0CF97 657 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 GTF2F1P35269 517 aaKnown RBP eCLIP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 DUSP4Q13115 394 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 CNGA2Q16280 664 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 NFE2Q16621 373 aaPredicted RBP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 SDHAF4Q5VUM1 108 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 Q7L0L9 218 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 DNAAF5Q86Y56 855 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 C1orf131Q8NDD1 294 aaKnown RBP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 SECISBP2LQ93073 1101 aaKnown RBP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 PPP1R9BQ96SB3 815 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 SEPT5Q99719 369 aaPredicted RBP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 SMOQ99835 787 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 HESX1Q9UBX0 185 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 AFF4Q9UHB7 1163 aaKnown RBP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 KIAA1257Q9ULG3 409 aa13.89□□□□□ -0.19
CNOT4-204ENST00000414802 SPTBN5Q9NRC6 3674 aaKnown RBP13.89□□□□□ -0.19
CNOT4-204ENST00000414802 DDX3XO00571 662 aaKnown RBP eCLIP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 ABLIM3O94929 683 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 EPCAMP16422 314 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 TNFAIP3P21580 790 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 NRIP1P48552 1158 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 MAP3K7CLP57077 242 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 RBM10P98175 930 aaKnown RBP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 PDE4CQ08493 712 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 MTF1Q14872 753 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 STILQ15468 1287 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 PTPROQ16827 1216 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 MGAT5BQ3V5L5 792 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 PDE12Q6L8Q7 609 aaKnown RBP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 LLGL2Q6P1M3 1020 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 CLEC20AQ6ZU45 233 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 ZNF677Q86XU0 584 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 SCN4BQ8IWT1 228 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 ZMIZ2Q8NF64 920 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 SPPL2BQ8TCT7 592 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 SMARCD1Q96GM5 515 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 CYP4F11Q9HBI6 524 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 CYTH4Q9UIA0 394 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 PCDHGC3Q9UN70 934 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 TMCO5BA8MYB1 307 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 F8VP50 259 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 GLUD1P00367 558 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 NPR3P17342 541 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 FECHP22830 423 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 RGS7P49802 495 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 CLCN4P51793 760 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 BCAT1P54687 386 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 BST2Q10589 180 aaKnown RBP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 ADGRE1Q14246 886 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 DDR2Q16832 855 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 CFAP221Q4G0U5 840 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 PKDCCQ504Y2 493 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 HABP4Q5JVS0 413 aaKnown RBP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 NAA35Q5VZE5 725 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 TPGS2Q68CL5 300 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 SMYD5Q6GMV2 418 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 CYP26C1Q6V0L0 522 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 LRRC8AQ8IWT6 810 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 ANKRD52Q8NB46 1076 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 ZNF461Q8TAF7 563 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 GPR152Q8TDT2 470 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 ZNF830Q96NB3 372 aaPredicted RBP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 KCNK16Q96T55 309 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 BAG1Q99933 345 aaPredicted RBP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 DUSP16Q9BY84 665 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 DEF6Q9H4E7 631 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 NHEJ1Q9H9Q4 299 aaPredicted RBP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 SPTLC3Q9NUV7 552 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 TAS2R14Q9NYV8 317 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 FBXW11Q9UKB1 542 aa13.88□□□□□ -0.19
CNOT4-204ENST00000414802 BZW2Q9Y6E2 419 aaKnown RBP13.88□□□□□ -0.19
CNOT4-204ENST00000414802 PIK3R2O00459 728 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 HAPLN1P10915 354 aaPredicted RBP13.87□□□□□ -0.19
CNOT4-204ENST00000414802 ATF2P15336 505 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 GRIK1P39086 918 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 KIF11P52732 1056 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 NOMO3P69849 1222 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 CCZ1BP86790 482 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 CCZ1P86791 482 aaPredicted RBP13.87□□□□□ -0.19
CNOT4-204ENST00000414802 CDK17Q00537 523 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 CLEC16AQ2KHT3 1053 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 TCEAL5Q5H9L2 206 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 RAD9BQ6WBX8 426 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 GPRIN1Q7Z2K8 1008 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 CPA5Q8WXQ8 436 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 FUBP3Q96I24 572 aaKnown RBP eCLIP13.87□□□□□ -0.19
CNOT4-204ENST00000414802 KCNF1Q9H3M0 494 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 IGFLR1Q9H665 355 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 TLE6Q9H808 572 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 DMAP1Q9NPF5 467 aaPredicted RBP13.87□□□□□ -0.19
CNOT4-204ENST00000414802 MAN1C1Q9NR34 630 aa13.87□□□□□ -0.19
CNOT4-204ENST00000414802 TJP2Q9UDY2 1190 aa13.87□□□□□ -0.19
Retrieved 100 of 20,778 RNA–protein pairs in 28.3 ms