RNA–Protein interactions for RNA: ENST00000413578.5

LIMS2-210, Transcript of LIM zinc finger domain containing 2, humanhuman

TSL 3

Gene LIMS2, Length 930 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LIMS2-210ENST00000413578 ARL14EPQ8N8R7 260 aaPredicted RBP13.05□□□□□ -0.32
LIMS2-210ENST00000413578 KRI1Q8N9T8 703 aaKnown RBP13.05□□□□□ -0.32
LIMS2-210ENST00000413578 SAAL1Q96ER3 474 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 EPSTI1Q96J88 318 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 FAM213AQ9BRX8 229 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 LINC00597Q9H2U6 94 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 TRPC7Q9HCX4 862 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 ITGA11Q9UKX5 1188 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 LAMA1P25391 3075 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 DENND4CQ5VZ89 1909 aa13.05□□□□□ -0.32
LIMS2-210ENST00000413578 OBSL1O75147 1896 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 ZZEF1O43149 2961 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 FRMD3A2A2Y4 597 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 MYMKA6NI61 221 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 C4orf47A7E2U8 309 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 CDX4O14627 284 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-210ENST00000413578 GIPC1O14908 333 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 PFKLP17858 780 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 GARTP22102 1010 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 PCSK1P29120 753 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 LHX1P48742 406 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 NOVA1P51513 510 aaKnown RBP13.04□□□□□ -0.32
LIMS2-210ENST00000413578 CASP5P51878 434 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 SF3A1Q15459 793 aaKnown RBP13.04□□□□□ -0.32
LIMS2-210ENST00000413578 DYMQ7RTS9 669 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 BRAPQ7Z569 592 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 C11orf74Q86VG3 221 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 ADGRF2Q8IZF7 708 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 KIAA1958Q8N8K9 716 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 TSTD1Q8NFU3 115 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 OLIG1Q8TAK6 271 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 KBTBD7Q8WVZ9 684 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 SPATA17Q96L03 361 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 CNOT6LQ96LI5 555 aaKnown RBP13.04□□□□□ -0.32
LIMS2-210ENST00000413578 CBWD1Q9BRT8 395 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 FGFBP2Q9BYJ0 223 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 OLFML3Q9NRN5 406 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 RBAKQ9NYW8 714 aaPredicted RBP13.04□□□□□ -0.32
LIMS2-210ENST00000413578 STK17AQ9UEE5 414 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 SNX9Q9Y5X1 595 aa13.04□□□□□ -0.32
LIMS2-210ENST00000413578 C1QTNF9BB2RNN3 333 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 ATP2C2O75185 946 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 OLFM2O95897 454 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 LDHAP00338 332 aaKnown RBP13.03□□□□□ -0.32
LIMS2-210ENST00000413578 C1QTNF9P0C862 333 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 HNRNPLP14866 589 aaKnown RBP eCLIP13.03□□□□□ -0.32
LIMS2-210ENST00000413578 CSRP1P21291 193 aaKnown RBP13.03□□□□□ -0.32
LIMS2-210ENST00000413578 BCKDHBP21953 392 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 DGKEP52429 567 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 USP46P62068 366 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 MESP2Q0VG99 397 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 NR1H3Q13133 447 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 KCNB1Q14721 858 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 UNQ6494/PRO21346Q6UXR6 183 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 DPH6Q7L8W6 267 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 SPATA2LQ8IUW3 424 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-210ENST00000413578 CSGALNACT2Q8N6G5 542 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 FSIP1Q8NA03 581 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 KDF1Q8NAX2 398 aaPredicted RBP13.03□□□□□ -0.32
LIMS2-210ENST00000413578 MDGA1Q8NFP4 955 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 RASSF8Q8NHQ8 419 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 CCDC26Q8TAB7 109 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 CACTINQ8WUQ7 758 aaKnown RBP13.03□□□□□ -0.32
LIMS2-210ENST00000413578 CEP295NLQ96MC4 621 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 ACCSQ96QU6 501 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 TTLL2Q9BWV7 592 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 TPSD1Q9BZJ3 242 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 MTMR12Q9C0I1 747 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 MRPL44Q9H9J2 332 aaKnown RBP13.03□□□□□ -0.32
LIMS2-210ENST00000413578 PDE11AQ9HCR9 933 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 CRTAC1Q9NQ79 661 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 MMP17Q9ULZ9 603 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 EXOC7Q9UPT5 735 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 ATRXP46100 2492 aa13.03□□□□□ -0.32
LIMS2-210ENST00000413578 SPEGQ15772 3267 aa13.02□□□□□ -0.32
LIMS2-210ENST00000413578 PATE3B3GLJ2 98 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 NFATC1O95644 943 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 CYP17A1P05093 508 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 GAP43P17677 238 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 HDCP19113 662 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 LMO2P25791 158 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 GBP1P32455 592 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 RBP5P82980 135 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 ZNF252P-AS1Q0IIN9 211 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 PSMD2Q13200 908 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 CRY1Q16526 586 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 USP39Q53GS9 565 aaKnown RBP13.02□□□□□ -0.33
LIMS2-210ENST00000413578 SH3PXD2AQ5TCZ1 1133 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 DAB2IPQ5VWQ8 1189 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 ANO7Q6IWH7 933 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 VSTM1Q6UX27 236 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 TMEM92Q6UXU6 159 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 SCN4BQ8IWT1 228 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 MYLPFQ96A32 169 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 TBC1D7Q9P0N9 293 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 EVLQ9UI08 416 aaPredicted RBP13.02□□□□□ -0.33
LIMS2-210ENST00000413578 FBXO2Q9UK22 296 aaPredicted RBP13.02□□□□□ -0.33
LIMS2-210ENST00000413578 RALYQ9UKM9 306 aaKnown RBP13.02□□□□□ -0.33
LIMS2-210ENST00000413578 INVSQ9Y283 1065 aa13.02□□□□□ -0.33
LIMS2-210ENST00000413578 PTPRJQ12913 1337 aa13.02□□□□□ -0.33
Retrieved 100 of 20,778 RNA–protein pairs in 22.6 ms