RNA–Protein interactions for RNA: ENST00000413232.5

CPSF7-204, Transcript of cleavage and polyadenylation specific factor 7, humanhuman

TSL 3

Gene CPSF7, Length 727 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF7-204ENST00000413232 WDR49Q8IV35 697 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 IQUBQ8NA54 791 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 ZNF516Q92618 1163 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 SECISBP2LQ93073 1101 aaKnown RBP20.57■□□□□ 0.88
CPSF7-204ENST00000413232 SNX21Q969T3 373 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 FUBP3Q96I24 572 aaKnown RBP eCLIP20.57■□□□□ 0.88
CPSF7-204ENST00000413232 MRPL45Q9BRJ2 306 aaKnown RBP20.57■□□□□ 0.88
CPSF7-204ENST00000413232 LRRC27Q9C0I9 530 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 KIF9Q9HAQ2 790 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 TRPC7Q9HCX4 862 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 GCNT4Q9P109 453 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 USP18Q9UMW8 372 aa20.57■□□□□ 0.88
CPSF7-204ENST00000413232 ZFP91-CNTFA0A0A6YYC7 529 aaPredicted RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 TRDMT1O14717 391 aaKnown RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 EGFP01133 1207 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 DLATP10515 647 aaKnown RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 WARSP23381 471 aaKnown RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 MAGEA11P43364 429 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 PXNP49023 591 aaPredicted RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 CYP2J2P51589 502 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 ATXN1P54253 815 aaKnown RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 ZXDBP98169 803 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 AMPD3Q01432 767 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 ZNF77Q15935 545 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 LAIR1Q6GTX8 287 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 SYNPOQ8N3V7 929 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 GPR161Q8N6U8 529 aaKnown RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 ARL14EPQ8N8R7 260 aaPredicted RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 UXTQ9UBK9 157 aaPredicted RBP20.56■□□□□ 0.88
CPSF7-204ENST00000413232 GMEB2Q9UKD1 530 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 CDH9Q9ULB4 789 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 PCDHA7Q9UN72 937 aa20.56■□□□□ 0.88
CPSF7-204ENST00000413232 MYH10P35580 1976 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 GALK1P51570 392 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 FAM160A1Q05DH4 1040 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 CYP24A1Q07973 514 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 CUL4BQ13620 913 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 MTF1Q14872 753 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 UNC13DQ70J99 1090 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 GRAMD1CQ8IYS0 662 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 TTC16Q8NEE8 873 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 EZH1Q92800 747 aaPredicted RBP20.55■□□□□ 0.88
CPSF7-204ENST00000413232 CCDC127Q96BQ5 260 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 PCED1BQ96HM7 432 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 MMS19Q96T76 1030 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 KIAA1586Q9HCI6 787 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 SLC39A2Q9NP94 309 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 TMEM30AQ9NV96 361 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 MAGEC2Q9UBF1 373 aaPredicted RBP20.55■□□□□ 0.88
CPSF7-204ENST00000413232 RAB23Q9ULC3 237 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 WNT6Q9Y6F9 365 aa20.55■□□□□ 0.88
CPSF7-204ENST00000413232 DYNC1LI1Q9Y6G9 523 aaKnown RBP20.55■□□□□ 0.88
CPSF7-204ENST00000413232 MYO18AQ92614 2054 aaKnown RBP20.54■□□□□ 0.88
CPSF7-204ENST00000413232 ZSCAN22P10073 491 aaPredicted RBP20.54■□□□□ 0.88
CPSF7-204ENST00000413232 TNNI1P19237 187 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 HOXA6P31267 233 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 GJA4P35212 333 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 CACNA2D1P54289 1103 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 USP4Q13107 963 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 PSMD6Q15008 389 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 CC2D1AQ6P1N0 951 aaPredicted RBP20.54■□□□□ 0.88
CPSF7-204ENST00000413232 PLEKHO2Q8TD55 490 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 CGRRF1Q99675 332 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 LINC00597Q9H2U6 94 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 ECT2Q9H8V3 914 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 R3HCC1Q9Y3T6 440 aaKnown RBP20.54■□□□□ 0.88
CPSF7-204ENST00000413232 ABCA7Q8IZY2 2146 aa20.54■□□□□ 0.88
CPSF7-204ENST00000413232 TRAV19A0A0A6YYK7 116 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 F13A1P00488 732 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 CKMP06732 381 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 RETP07949 1114 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 USP17L7P0C7H9 530 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 GRIK1P39086 918 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 AFMP43652 599 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 CASP4P49662 377 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 CYP27A1Q02318 531 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 GRSF1Q12849 480 aaKnown RBP eCLIP20.53■□□□□ 0.88
CPSF7-204ENST00000413232 EML3Q32P44 896 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 VSTM1Q6UX27 236 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 C4orf50Q6ZRC1 276 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 WDR5BQ86VZ2 330 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 XXYLT1Q8NBI6 393 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 MYCBPAPQ8TBZ2 947 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 OSCP1Q8WVF1 389 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 ELMO3Q96BJ8 720 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 SPATA17Q96L03 361 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 DPEP3Q9H4B8 488 aa20.53■□□□□ 0.88
CPSF7-204ENST00000413232 DUS2Q9NX74 493 aaKnown RBP20.53■□□□□ 0.88
CPSF7-204ENST00000413232 CNOT1A5YKK6 2376 aaKnown RBP20.53■□□□□ 0.88
CPSF7-204ENST00000413232 TPRP12270 2363 aaKnown RBP20.52■□□□□ 0.88
CPSF7-204ENST00000413232 ANTXRLA6NF34 631 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 RNF40O75150 1001 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 HDCP19113 662 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 CNR2P34972 360 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 GNL1P36915 607 aaPredicted RBP20.52■□□□□ 0.88
CPSF7-204ENST00000413232 MYL6P60660 151 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 LMNB2Q03252 620 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 PDGFRLQ15198 375 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 BMT2Q1RMZ1 405 aa20.52■□□□□ 0.88
CPSF7-204ENST00000413232 MDH1BQ5I0G3 518 aa20.52■□□□□ 0.88
Retrieved 100 of 20,778 RNA–protein pairs in 48 ms