RNA–Protein interactions for RNA: ENST00000412686.5

CPSF4-202, Transcript of cleavage and polyadenylation specific factor 4, humanhuman

TSL 5

Gene CPSF4, Length 745 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CPSF4-202ENST00000412686 SHKBP1Q8TBC3 707 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 SLC2A14Q8TDB8 520 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 C2orf15Q8WU43 125 aaKnown RBP8.21□□□□□ -1.1
CPSF4-202ENST00000412686 FGF13Q92913 245 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 PSMG2Q969U7 264 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 ZNF512Q96ME7 567 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-202ENST00000412686 KREMEN1Q96MU8 473 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 KCNK16Q96T55 309 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 TUBGCP2Q9BSJ2 902 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 MED10Q9BTT4 135 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 NT5C1AQ9BXI3 368 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 VPS16Q9H269 839 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 IL21Q9HBE4 155 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 SIX2Q9NPC8 291 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 PRKAG3Q9UGI9 489 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 MAFFQ9ULX9 164 aa8.21□□□□□ -1.1
CPSF4-202ENST00000412686 MAGED2Q9UNF1 606 aaPredicted RBP8.21□□□□□ -1.1
CPSF4-202ENST00000412686 MRPS23Q9Y3D9 190 aaKnown RBP8.21□□□□□ -1.1
CPSF4-202ENST00000412686 PATJQ8NI35 1801 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 A0A1W2PRU2 124 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 SLC38A8A6NNN8 435 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 RNF225M0QZC1 329 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 PES1O00541 588 aaKnown RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 TADA3O75528 432 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 HMGA1P17096 107 aaKnown RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 PTMSP20962 102 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 ACO1P21399 889 aaKnown RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 PON1P27169 355 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 GABRR2P28476 465 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 GRIK1P39086 918 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 KLK7P49862 253 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 EPHA5P54756 1037 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 USP46P62068 366 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 CYP4F8P98187 520 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 KCNMA1Q12791 1236 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 SMARCB1Q12824 385 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 IFRD2Q12894 506 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 VEPH1Q14D04 833 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 MAPRE1Q15691 268 aaKnown RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 PTPN21Q16825 1174 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 IQCEQ6IPM2 695 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 DPY19L2P1Q6NXN4 242 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 TRIM65Q6PJ69 517 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 GAREM2Q75VX8 874 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 PDZD4Q76G19 769 aaPredicted RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 RTL10Q7L3V2 364 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 APTXQ7Z2E3 356 aaKnown RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 UNC93AQ86WB7 457 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 RNF135Q8IUD6 432 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 GPIHBP1Q8IV16 184 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 NPAS3Q8IXF0 933 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 CRYBG2Q8N1P7 616 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 ELMOD1Q8N336 334 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 SLC4A11Q8NBS3 891 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 ZMIZ2Q8NF64 920 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 RSAD2Q8WXG1 361 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 JAKMIP2Q96AA8 810 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 MCRS1Q96EZ8 462 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 TMEM176AQ96HP8 235 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 FUBP3Q96I24 572 aaKnown RBP eCLIP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 TNIP3Q96KP6 325 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 ZSWIM3Q96MP5 696 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 ZSWIM1Q9BR11 485 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 RPP25Q9BUL9 199 aaKnown RBP8.2□□□□□ -1.1
CPSF4-202ENST00000412686 NDST4Q9H3R1 872 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 ABCB6Q9NP58 842 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 ASAH2Q9NR71 780 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 KRT82Q9NSB4 513 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 HSFX1Q9UBD0 423 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 LIMD1Q9UGP4 676 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 MUTYHQ9UIF7 546 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 USTQ9Y2C2 406 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 PCDHB4Q9Y5E5 795 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 MYH10P35580 1976 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 NCANO14594 1321 aa8.2□□□□□ -1.1
CPSF4-202ENST00000412686 MYO16Q9Y6X6 1858 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 DENND4CQ5VZ89 1909 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 UNC80Q8N2C7 3258 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 DLL1O00548 723 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 AP1G2O75843 785 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 NOL4O94818 638 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 PNMA6AP0CW24 399 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 LAMP2P13473 410 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 ZNF18P17022 549 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 TBXAS1P24557 533 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 EEF1GP26641 437 aaKnown RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 MAGEA11P43364 429 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 ZNF165P49910 485 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 COPB1P53618 953 aaKnown RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 RPL10AP62906 217 aaKnown RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 CETN1Q12798 172 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 IQCB1Q15051 598 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 ARHGAP44Q17R89 818 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 EXOC3L4Q17RC7 722 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 PPP1R26Q5T8A7 1209 aaPredicted RBP8.19□□□□□ -1.1
CPSF4-202ENST00000412686 CYP4A22Q5TCH4 519 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 TMEM270Q6UE05 265 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 PARM1Q6UWI2 310 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 VSTM1Q6UX27 236 aa8.19□□□□□ -1.1
CPSF4-202ENST00000412686 GBP6Q6ZN66 633 aa8.19□□□□□ -1.1
Retrieved 100 of 20,778 RNA–protein pairs in 69.9 ms