RNA–Protein interactions for RNA: ENST00000412640.6

SOX9-AS1-201, SOX9 antisense RNA 1, humanhuman

TSL 3 BASIC

Gene SOX9-AS1, Length 635 nt, Biotype lincRNA, Subcellular localisation Cytoplasm .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SOX9-AS1-201ENST00000412640 GTSE1Q9NYZ3 720 aa10.26□□□□□ -0.77
SOX9-AS1-201ENST00000412640 LARSQ9P2J5 1176 aaKnown RBP10.26□□□□□ -0.77
SOX9-AS1-201ENST00000412640 PIEZO2Q9H5I5 2752 aa10.26□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NUP205Q92621 2012 aa10.26□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ARID2Q68CP9 1835 aa10.26□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ZMYM2Q9UBW7 1377 aa10.26□□□□□ -0.77
SOX9-AS1-201ENST00000412640 USP9XQ93008 2570 aaPredicted RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 SFI1A8K8P3 1242 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ZNF197O14709 1029 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CETN3O15182 167 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CHADO15335 359 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 SLC16A3O15427 465 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TGFB1I1O43294 461 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 MFAP3LO75121 409 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 DGAT1O75907 488 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 PRPF6O94906 941 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 GCNT3O95395 438 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 LRG1P02750 347 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ENGP17813 658 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 SCP2P22307 547 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 RPL13P26373 211 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NCKAP1LP55160 1127 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 MCCD1P59942 119 aaPredicted RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 GTF2BQ00403 316 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 PPP2R3AQ06190 1150 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 SRSF1Q07955 248 aaKnown RBP eCLIP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ADAM9Q13443 819 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 HSP90AA2PQ14568 343 aaPredicted RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TARBP2Q15633 366 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 VWA3BQ502W6 1294 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TRIM61Q5EBN2 209 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 XKR9Q5GH70 373 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 PMS2CLQ68D20 193 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CNGA4Q8IV77 575 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 SLC9A9Q8IVB4 645 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TRIM59Q8IWR1 403 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 C12orf56Q8IXR9 622 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 HS6ST3Q8IZP7 471 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 PIP4K2CQ8TBX8 421 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 SPIRE2Q8WWL2 714 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 KIFAP3Q92845 792 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 HVCN1Q96D96 273 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NTPCRQ9BSD7 190 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NUP58Q9BVL2 599 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NAA15Q9BXJ9 866 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NIFKQ9BYG3 293 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TTYH3Q9C0H2 523 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NDST4Q9H3R1 872 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 DMAC2Q9NW81 257 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CGNQ9P2M7 1197 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 MBD1Q9UIS9 605 aaPredicted RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 APC2O95996 2303 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TDRD15B5MCY1 1934 aaKnown RBP10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 PLXNB3Q9ULL4 1909 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 MYH11P35749 1972 aa10.25□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ACACAQ13085 2346 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 A0A1W2PQJ5 194 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 MAP3K13O43283 966 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 USO1O60763 962 aaKnown RBP10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NR2F2P24468 414 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NMT1P30419 496 aaKnown RBP10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ABCD1P33897 745 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 DHPSP49366 369 aaPredicted RBP10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NPEPPSP55786 919 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 LMAN2Q12907 356 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 FKBP15Q5T1M5 1219 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CEP135Q66GS9 1140 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 PDZD4Q76G19 769 aaPredicted RBP10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 GSTCDQ8NEC7 633 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 MCPH1Q8NEM0 835 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CCDC43Q96MW1 224 aaKnown RBP10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CAMK1GQ96NX5 476 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CEP89Q96ST8 783 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NUSAP1Q9BXS6 441 aaKnown RBP10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TMEM206Q9H813 350 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TRPV4Q9HBA0 871 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 METTL14Q9HCE5 456 aaKnown RBP10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 FSCN3Q9NQT6 498 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 KLK14Q9P0G3 267 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 KCNG1Q9UIX4 513 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CAPN11Q9UMQ6 739 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 SIK3Q9Y2K2 1263 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CDY1Q9Y6F8 540 aa10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 URB1O60287 2271 aaKnown RBP10.24□□□□□ -0.77
SOX9-AS1-201ENST00000412640 A0A087WV48 116 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 IGKV6-21A0A0C4DH24 114 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 CASTOR2A6NHX0 329 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 UPK3BL1B0FP48 263 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 UPK3BL2E5RIL1 263 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ATG13O75143 517 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 MOSPD3O75425 235 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 KIF4AO95239 1232 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 NR3C1P04150 777 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 TPM1P09493 284 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 SRGAP2CP0DJJ0 459 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 MYL4P12829 197 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 BCKDHBP21953 392 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 AKAP5P24588 427 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 DGKEP52429 567 aa10.23□□□□□ -0.77
SOX9-AS1-201ENST00000412640 ADKP55263 362 aaKnown RBP10.23□□□□□ -0.77
Retrieved 100 of 20,778 RNA–protein pairs in 19.6 ms