RNA–Protein interactions for RNA: ENST00000412562.1

PHBP3-201, Transcript of prohibitin pseudogene 3, humanhuman

BASIC

Gene PHBP3, Length 819 nt, Biotype processed pseudogene.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
PHBP3-201ENST00000412562 PLCB2Q00722 1185 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 CYP27A1Q02318 531 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 STK4Q13043 487 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 RUNX3Q13761 415 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 LRRC32Q14392 662 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 MDH1BQ5I0G3 518 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 DPH6Q7L8W6 267 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 XXYLT1Q8NBI6 393 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 TRMT2BQ96GJ1 504 aaKnown RBP13.18□□□□□ -0.3
PHBP3-201ENST00000412562 MYRFLQ96LU7 910 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 CGRRF1Q99675 332 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 LINC00597Q9H2U6 94 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 GCNT4Q9P109 453 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 MAGEC2Q9UBF1 373 aaPredicted RBP13.18□□□□□ -0.3
PHBP3-201ENST00000412562 RCOR1Q9UKL0 485 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 CDH9Q9ULB4 789 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 R3HCC1Q9Y3T6 440 aaKnown RBP13.18□□□□□ -0.3
PHBP3-201ENST00000412562 WNT6Q9Y6F9 365 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 OBSL1O75147 1896 aa13.18□□□□□ -0.3
PHBP3-201ENST00000412562 TPRP12270 2363 aaKnown RBP13.17□□□□□ -0.3
PHBP3-201ENST00000412562 ANTXRLA6NF34 631 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 ACTN4O43707 911 aaKnown RBP13.17□□□□□ -0.3
PHBP3-201ENST00000412562 EGFP01133 1207 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 HSP90AA1P07900 732 aaKnown RBP13.17□□□□□ -0.3
PHBP3-201ENST00000412562 GNL1P36915 607 aaPredicted RBP13.17□□□□□ -0.3
PHBP3-201ENST00000412562 MAGEA11P43364 429 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 GALK1P51570 392 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 SURF1Q15526 300 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 BMT2Q1RMZ1 405 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 RSPO4Q2I0M5 234 aaPredicted RBP13.17□□□□□ -0.3
PHBP3-201ENST00000412562 WDR72Q3MJ13 1102 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 DGKKQ5KSL6 1271 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 PRR23BQ6ZRT6 265 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 OR6B3Q8NGW1 331 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 SPATA18Q8TC71 538 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 PAGE5Q96GU1 130 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 MSANTD3Q96H12 275 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 PCED1BQ96HM7 432 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 FUBP3Q96I24 572 aaKnown RBP eCLIP13.17□□□□□ -0.3
PHBP3-201ENST00000412562 FAM126AQ9BYI3 521 aaPredicted RBP13.17□□□□□ -0.3
PHBP3-201ENST00000412562 XYLT2Q9H1B5 865 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 KIAA1586Q9HCI6 787 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 FAM13BQ9NYF5 915 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 NXF1Q9UBU9 619 aaKnown RBP13.17□□□□□ -0.3
PHBP3-201ENST00000412562 ZDHHC9Q9Y397 364 aa13.17□□□□□ -0.3
PHBP3-201ENST00000412562 A0A1B0GVL5 298 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 PVALEFA0A1B0GWK0 134 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 MED19A0JLT2 244 aaPredicted RBP13.16□□□□□ -0.3
PHBP3-201ENST00000412562 CLDN5O00501 218 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 SCAMP3O14828 347 aaKnown RBP13.16□□□□□ -0.3
PHBP3-201ENST00000412562 EXOC3O60645 756 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 CKMP06732 381 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 DDX6P26196 483 aaKnown RBP eCLIP13.16□□□□□ -0.3
PHBP3-201ENST00000412562 GRIK1P39086 918 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 RAP1GAPP47736 663 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 NRLP54845 237 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 CDH8P55286 799 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 DLG4P78352 724 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 SPEM2Q0P670 501 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 MTF1Q14872 753 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 ZNF77Q15935 545 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 KNOP1Q1ED39 458 aaKnown RBP13.16□□□□□ -0.3
PHBP3-201ENST00000412562 TMEM196Q5HYL7 178 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 C4orf50Q6ZRC1 276 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 HS2ST1Q7LGA3 356 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 KIAA0895Q8NCT3 520 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 MYCBPAPQ8TBZ2 947 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 SH3RF2Q8TEC5 729 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 EZH1Q92800 747 aaPredicted RBP13.16□□□□□ -0.3
PHBP3-201ENST00000412562 FNBP1Q96RU3 617 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 IER2Q9BTL4 223 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 B3GNT5Q9BYG0 378 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 ZNF518BQ9C0D4 1074 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 RNF38Q9H0F5 515 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 SNX25Q9H3E2 840 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 SMYD3Q9H7B4 428 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 MAGEF1Q9HAY2 307 aa13.16□□□□□ -0.3
PHBP3-201ENST00000412562 ZNF638Q14966 1978 aaKnown RBP13.16□□□□□ -0.3
PHBP3-201ENST00000412562 UBE4BO95155 1302 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 TRAV19A0A0A6YYK7 116 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 LRRIQ3A6PVS8 624 aaPredicted RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 F8VP50 259 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 TRDMT1O14717 391 aaKnown RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 TACC1O75410 805 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 VNN1O95497 513 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 USP17L7P0C7H9 530 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 SLFN14P0C7P3 912 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 PFKFB1P16118 471 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 PTPN1P18031 435 aaKnown RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 HDCP19113 662 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 GJA4P35212 333 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 FAM160A1Q05DH4 1040 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 USP4Q13107 963 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 SIM2Q14190 667 aaPredicted RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 ZNF268Q14587 947 aaPredicted RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 KMT5BQ4FZB7 885 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 TDRD10Q5VZ19 366 aaKnown RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 CC2D1AQ6P1N0 951 aaPredicted RBP13.15□□□□□ -0.3
PHBP3-201ENST00000412562 C1orf228Q6PIY5 440 aa13.15□□□□□ -0.3
PHBP3-201ENST00000412562 C12orf56Q8IXR9 622 aa13.15□□□□□ -0.3
Retrieved 100 of 20,778 RNA–protein pairs in 18.4 ms