RNA–Protein interactions for RNA: ENST00000411615.5

LINC02539-201, Transcript of long intergenic non-protein coding RNA 2539, humanhuman

TSL 2 BASIC

Gene LINC02539, Length 737 nt, Biotype lincRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
LINC02539-201ENST00000411615 ZC3H11BA0A1B0GUI2 810 aaPredicted RBP9.3□□□□□ -0.92
LINC02539-201ENST00000411615 O00370 1275 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 SOX1O00570 391 aaPredicted RBP9.3□□□□□ -0.92
LINC02539-201ENST00000411615 C2CD2LO14523 706 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 GFPT2O94808 682 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 SERPING1P05155 500 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 ACAT1P24752 427 aaKnown RBP9.3□□□□□ -0.92
LINC02539-201ENST00000411615 GNA15P30679 374 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 IRS1P35568 1242 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 TUFMP49411 452 aaKnown RBP9.3□□□□□ -0.92
LINC02539-201ENST00000411615 PDE6CP51160 858 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 ROR1Q01973 937 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 ASIC2Q16515 512 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 ZNF394Q53GI3 561 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 HABP4Q5JVS0 413 aaKnown RBP9.3□□□□□ -0.92
LINC02539-201ENST00000411615 PLPP4Q5VZY2 271 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 VSTM1Q6UX27 236 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 TRIM72Q6ZMU5 477 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 SLC47A2Q86VL8 602 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 FUKQ8N0W3 1084 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 TC2NQ8N9U0 490 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 ANKRD52Q8NB46 1076 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 EPS8L1Q8TE68 723 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 CPLX3Q8WVH0 158 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 DDX1Q92499 740 aaKnown RBP9.3□□□□□ -0.92
LINC02539-201ENST00000411615 CYFIP2Q96F07 1278 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 PCED1BQ96HM7 432 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 B3GNT5Q9BYG0 378 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 LHX5Q9H2C1 402 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 DPEP3Q9H4B8 488 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 CSNK1G1Q9HCP0 422 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 ABHD10Q9NUJ1 306 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 NOCTQ9UK39 431 aaKnown RBP9.3□□□□□ -0.92
LINC02539-201ENST00000411615 PCDHB5Q9Y5E4 795 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 PTPRDP23468 1912 aa9.3□□□□□ -0.92
LINC02539-201ENST00000411615 RANBP2P49792 3224 aaKnown RBP9.3□□□□□ -0.92
LINC02539-201ENST00000411615 ATG2AQ2TAZ0 1938 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 SSU72P8A0A1W2PR75 194 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 WDR27A2RRH5 827 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 MTMR11A4FU01 709 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 HIDE1A8MVS5 230 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 ADAM12O43184 909 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 HCRTO43612 131 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 NCK2O43639 380 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 CLASP2O75122 1294 aaKnown RBP9.29□□□□□ -0.92
LINC02539-201ENST00000411615 PAPLNO95428 1278 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 SETSIPP0DME0 302 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 CPB1P15086 417 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 CD19P15391 556 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 KLRC2P26717 231 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 CDH5P33151 784 aaPredicted RBP9.29□□□□□ -0.92
LINC02539-201ENST00000411615 PSMC1P62191 440 aaKnown RBP9.29□□□□□ -0.92
LINC02539-201ENST00000411615 CDR2Q01850 454 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 KLHL30Q0D2K2 578 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 GRIN2CQ14957 1233 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 DUSP6Q16828 381 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 SLC39A12Q504Y0 691 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 PKDCCQ504Y2 493 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 MDH1BQ5I0G3 518 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 PPP1R26Q5T8A7 1209 aaPredicted RBP9.29□□□□□ -0.92
LINC02539-201ENST00000411615 HGSNATQ68CP4 663 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 PPP1R2P3Q6NXS1 205 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 ELMSAN1Q6PJG2 1045 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 WDR59Q6PJI9 974 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 TMEM184AQ6ZMB5 413 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 RNF19BQ6ZMZ0 732 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 PAQR9Q6ZVX9 377 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 SPATA2LQ8IUW3 424 aaPredicted RBP9.29□□□□□ -0.92
LINC02539-201ENST00000411615 TCEAL8Q8IYN2 117 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 C12orf29Q8N999 325 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 GDPD5Q8WTR4 605 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 STK32AQ8WU08 396 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 SLC22A17Q8WUG5 538 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 AUTS2Q8WXX7 1259 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 TFAP2BQ92481 460 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 MYLPFQ96A32 169 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 SMARCD1Q96GM5 515 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 TMEM209Q96SK2 561 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 SYT11Q9BT88 431 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 DUSP16Q9BY84 665 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 ZNF518BQ9C0D4 1074 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 PLEKHA4Q9H4M7 779 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 NSUN3Q9H649 340 aaKnown RBP9.29□□□□□ -0.92
LINC02539-201ENST00000411615 TLE6Q9H808 572 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 PNPLA8Q9NP80 782 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 CYLDQ9NQC7 956 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 TMLHEQ9NVH6 421 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 WDR3Q9UNX4 943 aaKnown RBP eCLIP9.29□□□□□ -0.92
LINC02539-201ENST00000411615 TRANK1O15050 2925 aa9.29□□□□□ -0.92
LINC02539-201ENST00000411615 RFXAPO00287 272 aa9.28□□□□□ -0.92
LINC02539-201ENST00000411615 THAP12O43422 761 aa9.28□□□□□ -0.92
LINC02539-201ENST00000411615 TGM5O43548 720 aa9.28□□□□□ -0.92
LINC02539-201ENST00000411615 VNN2O95498 520 aa9.28□□□□□ -0.92
LINC02539-201ENST00000411615 LSM8O95777 96 aaKnown RBP9.28□□□□□ -0.92
LINC02539-201ENST00000411615 GLUD1P00367 558 aa9.28□□□□□ -0.92
LINC02539-201ENST00000411615 POU2F2P09086 479 aa9.28□□□□□ -0.92
LINC02539-201ENST00000411615 OR4Q2P0C623 313 aa9.28□□□□□ -0.92
LINC02539-201ENST00000411615 PNMA6AP0CW24 399 aaPredicted RBP9.28□□□□□ -0.92
LINC02539-201ENST00000411615 HAPLN1P10915 354 aaPredicted RBP9.28□□□□□ -0.92
LINC02539-201ENST00000411615 RPL17P18621 184 aaKnown RBP9.28□□□□□ -0.92
Retrieved 100 of 20,778 RNA–protein pairs in 29.6 ms