RNA–Protein interactions for RNA: ENST00000409854.5

EPHA4-202, Transcript of EPH receptor A4, humanhuman

TSL 1 (best) BASIC

Gene EPHA4, Length 3,454 nt, Biotype protein coding, Subcellular localisation Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
EPHA4-202ENST00000409854 DCDC2CA8MYV0 355 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 SPOPO43791 374 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 CEP104O60308 925 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 GABBR2O75899 941 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 DDHD2O94830 711 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 GJB6O95452 261 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 MYCP01106 439 aaPredicted RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 ODC1P11926 461 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 CCDC130P13994 396 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PTPN1P18031 435 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 TKTP29401 623 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PSMC1P62191 440 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PLCB3Q01970 1234 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PIGHQ14442 188 aaPredicted RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 LRRC38Q5VT99 294 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PMF1Q6P1K2 205 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PAQR9Q6ZVX9 377 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PHLDB2Q86SQ0 1253 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 ZDHHC17Q8IUH5 632 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 FUKQ8N0W3 1084 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 URGCPQ8TCY9 931 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 DIS3LQ8TF46 1054 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 VWCEQ96DN2 955 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 RNPC3Q96LT9 517 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 LPIN3Q9BQK8 851 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 CRTAC1Q9NQ79 661 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 TBC1D13Q9NVG8 400 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 HESX1Q9UBX0 185 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 DSEQ9UL01 958 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 CDH9Q9ULB4 789 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 SH3BP1Q9Y3L3 701 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 E5RJQ4 531 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 CCDC188H7C350 402 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 TULP2O00295 520 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 DPYSL4O14531 572 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 XPO1O14980 1071 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PDGFRBP09619 1106 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 KRT3P12035 628 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 TYMPP19971 482 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 RFC2P35250 354 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 DNA2P51530 1060 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 RWDD2BP57060 319 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 TLE2Q04725 743 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 ACAP1Q15027 740 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 GLE1Q53GS7 698 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 WDR93Q6P2C0 686 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 OLFML1Q6UWY5 402 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 DSTYKQ6XUX3 929 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 FAM183BPQ6ZVS7 135 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 ARCQ7LC44 396 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 KATNAL2Q8IYT4 538 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 JOSD2Q8TAC2 188 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 CASD1Q96PB1 797 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 METTL5Q9NRN9 209 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 DDX43Q9NXZ2 648 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 PCDHB8Q9UN66 801 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 INPP5FQ9Y2H2 1132 aa5.82□□□□□ -1.48
EPHA4-202ENST00000409854 ZNF638Q14966 1978 aaKnown RBP5.82□□□□□ -1.48
EPHA4-202ENST00000409854 ARHGEF37A1IGU5 675 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 BHMG1C9JSJ3 638 aaPredicted RBP5.81□□□□□ -1.48
EPHA4-202ENST00000409854 KIF1CO43896 1103 aaKnown RBP5.81□□□□□ -1.48
EPHA4-202ENST00000409854 ATP2C2O75185 946 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 ITGB1P05556 798 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 TUBBP07437 444 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 RFC1P35251 1148 aaPredicted RBP5.81□□□□□ -1.48
EPHA4-202ENST00000409854 ATN1P54259 1190 aaPredicted RBP5.81□□□□□ -1.48
EPHA4-202ENST00000409854 TAS2R40P59535 323 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 FAM171BQ6P995 826 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 ZNF280BQ86YH2 543 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 RHOT1Q8IXI2 618 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 SLC2A14Q8TDB8 520 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 KCTD13Q8WZ19 329 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 HSFY1Q96LI6 401 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 PNKPQ96T60 521 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 NAP1L3Q99457 506 aaPredicted RBP5.81□□□□□ -1.48
EPHA4-202ENST00000409854 SYT15Q9BQS2 421 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 ACBD6Q9BR61 282 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 DUSP16Q9BY84 665 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 PARD6BQ9BYG5 372 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 EPC1Q9H2F5 836 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 HOXA2O43364 376 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 B3GAT3O94766 335 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 PYGMP11217 842 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 PCSK1P29120 753 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 ACADSBP45954 432 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 BRCC3P46736 316 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 SNX16P57768 344 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 SEL1L2Q5TEA6 688 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 TRNP1Q6NT89 227 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 DCUN1D2Q6PH85 259 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 FBXO38Q6PIJ6 1188 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 POLNQ7Z5Q5 900 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 NPAS4Q8IUM7 802 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 MYCBPAPQ8TBZ2 947 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 KHSRPQ92945 711 aaKnown RBP eCLIP5.81□□□□□ -1.48
EPHA4-202ENST00000409854 SCLYQ96I15 445 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 B3GNT5Q9BYG0 378 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 UBXN6Q9BZV1 441 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 C11orf49Q9H6J7 331 aa5.81□□□□□ -1.48
EPHA4-202ENST00000409854 C2CD4BA6NLJ0 364 aa5.8□□□□□ -1.48
Retrieved 100 of 20,778 RNA–protein pairs in 39 ms