RNA–Protein interactions for RNA: ENST00000409543.6

TSPAN4-209, Transcript of tetraspanin 4, humanhuman

APPRIS P1 TSL 5 BASIC

Gene TSPAN4, Length 1,031 nt, Biotype protein coding, Subcellular localisation Endoplasmic reticulum, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TSPAN4-209ENST00000409543 OBSL1O75147 1896 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 CACNA1IQ9P0X4 2223 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 A8MXQ7 604 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 GFRA3O60609 400 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 TADA3O75528 432 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 NR2F2P24468 414 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 RPL13P26373 211 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 GRIK1P39086 918 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 SGSM1Q2NKQ1 1148 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 C1orf228Q6PIY5 440 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 SV2AQ7L0J3 742 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 MAML2Q8IZL2 1156 aaPredicted RBP20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 TAF4BQ92750 862 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 SMYD3Q9H7B4 428 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 KIF9Q9HAQ2 790 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 NDRG2Q9UN36 371 aaKnown RBP20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 PTPRDP23468 1912 aa20.92■□□□□ 0.94
TSPAN4-209ENST00000409543 TRIM66O15016 1216 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 AKAP3O75969 853 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 SP9P0CG40 484 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 ANXA13P27216 316 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 VAMP7P51809 220 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 KPNA1P52294 538 aaPredicted RBP20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 ENPEPQ07075 957 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 C1orf220Q5T0J3 134 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 INTS8Q75QN2 995 aaKnown RBP20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 B3GALNT2Q8NCR0 500 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 ENGASEQ8NFI3 743 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 USP13Q92995 863 aaPredicted RBP20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 ZFYVE19Q96K21 471 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 C8orf48Q96LL4 319 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 DPEP3Q9H4B8 488 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 TDP1Q9NUW8 608 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 RMND1Q9NWS8 449 aa20.91■□□□□ 0.94
TSPAN4-209ENST00000409543 LAMTOR5O43504 91 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 P4HA1P13674 534 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 CCNE1P24864 410 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 CDH8P55286 799 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 FAM160A1Q05DH4 1040 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 ADAM9Q13443 819 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 PNOCQ13519 176 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 ZNF268Q14587 947 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 ZCWPW2Q504Y3 356 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 NKD2Q969F2 451 aaPredicted RBP20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 ELOVL4Q9GZR5 314 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 EHD2Q9NZN4 543 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 FBXO4Q9UKT5 387 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 CCL26Q9Y258 94 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 GREB1Q4ZG55 1949 aa20.9■□□□□ 0.94
TSPAN4-209ENST00000409543 PRR23AA6NEV1 266 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 CLSTN1O94985 981 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 KRT13P13646 458 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 PSMC2P35998 433 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 NOP14P78316 857 aaKnown RBP20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 EDRF1Q3B7T1 1238 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 ZNF528Q3MIS6 628 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 DENND5BQ6ZUT9 1274 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 ASCL5Q7RTU5 278 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 RALGPS2Q86X27 583 aaPredicted RBP20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 FAM186BQ8IYM0 893 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 GSDMAQ96QA5 445 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 TTLL2Q9BWV7 592 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 B3GNT5Q9BYG0 378 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 SDCBP2Q9H190 292 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 SEMA4AQ9H3S1 761 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 GKN1Q9NS71 199 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 GTSE1Q9NYZ3 720 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 PATJQ8NI35 1801 aa20.89■□□□□ 0.93
TSPAN4-209ENST00000409543 ZNF638Q14966 1978 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 USP34Q70CQ2 3546 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 TRAV19A0A0A6YYK7 116 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 F8VP50 259 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 SPECC1L-ADORA2AF8WAN1 911 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 ASS1P00966 412 aaKnown RBP20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 USP17L7P0C7H9 530 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 RAP1GAPP47736 663 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 SOX9P48436 509 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 MCCD1P59942 119 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 SCARA5Q6ZMJ2 495 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 MAMSTRQ6ZN01 415 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 SMYD4Q8IYR2 804 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 ELMO3Q96BJ8 720 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 TNIP3Q96KP6 325 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 TIGD1Q96MW7 591 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 FAM83CQ9BQN1 747 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 IER2Q9BTL4 223 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 ZNF518BQ9C0D4 1074 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 CHRDQ9H2X0 955 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 LMAN1LQ9HAT1 526 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 TRPC7Q9HCX4 862 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 GCNT4Q9P109 453 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 VPS13AQ96RL7 3174 aa20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 KIF26AQ9ULI4 1882 aaPredicted RBP20.88■□□□□ 0.93
TSPAN4-209ENST00000409543 SMC2O95347 1197 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 HLA-DRAP01903 254 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 CHRNB1P11230 501 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 CTHP32929 405 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 PIK3CAP42336 1068 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 CACNA2D1P54289 1103 aa20.87■□□□□ 0.93
TSPAN4-209ENST00000409543 USP46P62068 366 aa20.87■□□□□ 0.93
Retrieved 100 of 20,778 RNA–protein pairs in 31.2 ms