RNA–Protein interactions for RNA: ENST00000409478.5

R3HDM1-202, Transcript of R3H domain containing 1, humanhuman

TSL 1 (best) BASIC

Gene R3HDM1, Length 4,272 nt, Biotype protein coding, Subcellular localisation Cytoplasm, Cytosol, Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
R3HDM1-202ENST00000409478 ALDH18A1P54886 795 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ARHGAP8P85298 464 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 MYBPC1Q00872 1141 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ZBTB17Q13105 803 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 FASTKD3Q14CZ7 662 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 LLGL1Q15334 1064 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 SLC15A2Q16348 729 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 PGM2L1Q6PCE3 622 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 DRICH1Q6PGQ1 229 aaPredicted RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 USP17L2Q6R6M4 530 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CAPN12Q6ZSI9 719 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 LPCAT2Q7L5N7 544 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CPNE8Q86YQ8 564 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CRLF3Q8IUI8 442 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CCDC33Q8N5R6 958 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ARL10Q8N8L6 244 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 LMO3Q8TAP4 145 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CNBD2Q96M20 576 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 RILPQ96NA2 401 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 FAM111AQ96PZ2 611 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CCDC68Q9H2F9 335 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 SMYD3Q9H7B4 428 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ALG13Q9NP73 1137 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CNTN3Q9P232 1028 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CDH22Q9UJ99 828 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ANAPC7Q9UJX3 599 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 NOCTQ9UK39 431 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ITGA11Q9UKX5 1188 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 GPC6Q9Y625 555 aaPredicted RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 BCAP31P51572 246 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 SLC18A2Q05940 514 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 HIF1AQ16665 826 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CLEC4GQ6UXB4 293 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 KBTBD6Q86V97 674 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 DNAJC10Q8IXB1 793 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ZNF34Q8IZ26 560 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 PQLC1Q8N2U9 271 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 TRIML2Q8N7C3 387 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 DDHD1Q8NEL9 900 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 TRIM11Q96F44 468 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 LRGUKQ96M69 825 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ZMAT2Q96NC0 199 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 RUSC1Q9BVN2 902 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 IGSF9Q9P2J2 1179 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 HESX1Q9UBX0 185 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 APPL1Q9UKG1 709 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 IKBKGQ9Y6K9 419 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 MYPNQ86TC9 1320 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 COL18A1P39060 1754 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ZNF701M0R085 212 aaPredicted RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CLASP2O75122 1294 aaKnown RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ESRRBO95718 433 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 GSTT2P0CG29 244 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 GSTT2BP0CG30 244 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 TRIM49P0CI25 452 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 TRIM49CP0CI26 452 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 RPA1P27694 616 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CCR3P51677 355 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ARSEP51690 589 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 AQP5P55064 265 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 WASHC5Q12768 1159 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CIAPIN1Q6FI81 312 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 NIPAL1Q6NVV3 410 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 CATSPER3Q86XQ3 398 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 TRIM50Q86XT4 487 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ARID3BQ8IVW6 561 aaPredicted RBP6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 FAM71AQ8IYT1 594 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 ADCY4Q8NFM4 1077 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 DCAKDQ8WVC6 231 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 DYNLL2Q96FJ2 89 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 DHRS1Q96LJ7 313 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 KCNK16Q96T55 309 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 GLT8D2Q9H1C3 349 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 PALMDQ9NP74 551 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 BCAP29Q9UHQ4 241 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 RABGAP1Q9Y3P9 1069 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 TRIM17Q9Y577 477 aa6.09□□□□□ -1.43
R3HDM1-202ENST00000409478 GOLGA8RI6L899 631 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 LSM1O15116 133 aaKnown RBP6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 ASTN2O75129 1339 aaPredicted RBP6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 FAM13AO94988 1023 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 SGPL1O95470 568 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 FDX1P10109 184 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 GPX6P59796 221 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 SLC25A3Q00325 362 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 FMO1Q01740 532 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 GPS1Q13098 491 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 MYBPC2Q14324 1141 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 TGFBIQ15582 683 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 RNASEH2BQ5TBB1 312 aaKnown RBP6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 ACAD10Q6JQN1 1059 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 MAST2Q6P0Q8 1798 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 ZFP1Q6P2D0 407 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 NSMFQ6X4W1 530 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 RHOT1Q8IXI2 618 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 KATNAL2Q8IYT4 538 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 FBXW8Q8N3Y1 598 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 COA7Q96BR5 231 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 ACAP3Q96P50 834 aa6.08□□□□□ -1.44
R3HDM1-202ENST00000409478 PHF12Q96QT6 1004 aa6.08□□□□□ -1.44
Retrieved 100 of 20,778 RNA–protein pairs in 30.8 ms