RNA–Protein interactions for RNA: ENST00000409323.1

CHRNA1-204, Transcript of cholinergic receptor nicotinic alpha 1 subunit, humanhuman

TSL 1 (best) BASIC

Gene CHRNA1, Length 1,585 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRNA1-204ENST00000409323 APOL5Q9BWW9 433 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 IMPACTQ9P2X3 320 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 HCFC2Q9Y5Z7 792 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 MTCH2Q9Y6C9 303 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 DOCK6Q96HP0 2047 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 MTCL1Q9Y4B5 1905 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 TMCO5BA8MYB1 307 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 F8VP50 259 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 FAM200BP0CF97 657 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 ATF2P15336 505 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 EIF4A3P38919 411 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 GRIK1P39086 918 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 BPIFB4P59827 614 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 PDE4CQ08493 712 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 HYAL1Q12794 435 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 MAPRE1Q15691 268 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 CCDC85BQ15834 202 aaPredicted RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 CNGA2Q16280 664 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 NFE2Q16621 373 aaPredicted RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 TSR1Q2NL82 804 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 C2CD6Q53TS8 623 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 ARHGAP17Q68EM7 881 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 PDE12Q6L8Q7 609 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 C4orf50Q6ZRC1 276 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 KREMEN2Q8NCW0 462 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 C1orf131Q8NDD1 294 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 ZMIZ2Q8NF64 920 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 OLIG1Q8TAK6 271 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 SLC7A14Q8TBB6 771 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 GIPC2Q8TF65 315 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 SLC22A17Q8WUG5 538 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 AGPAT1Q99943 283 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 HNRNPUL1Q9BUJ2 856 aaKnown RBP eCLIP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 FAM124BQ9H5Z6 455 aaPredicted RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 NSUN3Q9H649 340 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 MAN1C1Q9NR34 630 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 AFF4Q9UHB7 1163 aaKnown RBP14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 CYTH4Q9UIA0 394 aa14.94□□□□□ -0.02
CHRNA1-204ENST00000409323 SPDYE4A6NLX3 237 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 GOLGA6L6A8MZA4 724 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 MED7O43513 233 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 RFPL2O75678 378 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 SERPING1P05155 500 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 PTMAP06454 111 aaKnown RBP14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 ELF1P32519 619 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 CDR2Q01850 454 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 DUSP6Q16828 381 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 NAA35Q5VZE5 725 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 LILRA6Q6PI73 481 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 LCLAT1Q6UWP7 414 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 CLEC20AQ6ZU45 233 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 GPRIN1Q7Z2K8 1008 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 GPR65Q8IYL9 337 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 C12orf76Q8N812 135 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 SLC30A5Q8TAD4 765 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 CPA5Q8WXQ8 436 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 PPM1EQ8WY54 764 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 SYN2Q92777 582 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 SMARCD1Q96GM5 515 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 GAS2L1Q99501 681 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 CDX2Q99626 313 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 OXCT2Q9BYC2 517 aaPredicted RBP14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 NUCKS1Q9H1E3 243 aaKnown RBP14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 ZNHIT6Q9NWK9 470 aaKnown RBP14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 TAS2R14Q9NYV8 317 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 HESX1Q9UBX0 185 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 TJP2Q9UDY2 1190 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 FBXW11Q9UKB1 542 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 YIPF1Q9Y548 306 aa14.93□□□□□ -0.02
CHRNA1-204ENST00000409323 SOWAHDA6NJG2 315 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 C8AP07357 584 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 CCDC172P0C7W6 258 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 HAPLN1P10915 354 aaPredicted RBP14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 NPR3P17342 541 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 ATF6P18850 670 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 TNFAIP3P21580 790 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 PRKCIP41743 596 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 TWF1Q12792 350 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 MTMR3Q13615 1198 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 MTF1Q14872 753 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 TPGS2Q68CL5 300 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 PHLDB2Q86SQ0 1253 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 WDTC1Q8N5D0 677 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 ANKRD52Q8NB46 1076 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 SPPL2BQ8TCT7 592 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 ZNF830Q96NB3 372 aaPredicted RBP14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 GUCD1Q96NT3 240 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 SYT11Q9BT88 431 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 DUSP16Q9BY84 665 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 DNAI2Q9GZS0 605 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 ST7Q9NRC1 585 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 SPTLC3Q9NUV7 552 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 ADAMTS1Q9UHI8 967 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 KIAA1257Q9ULG3 409 aa14.92□□□□□ -0.02
CHRNA1-204ENST00000409323 DDX3XO00571 662 aaKnown RBP eCLIP14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 CCL16O15467 120 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 GLP2RO95838 553 aa14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 HNRNPH3P31942 346 aaKnown RBP14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 GFPT1Q06210 699 aaPredicted RBP14.91□□□□□ -0.02
CHRNA1-204ENST00000409323 MEA1Q16626 185 aa14.91□□□□□ -0.02
Retrieved 100 of 20,778 RNA–protein pairs in 21.1 ms