RNA–Protein interactions for RNA: ENST00000409285.6

VSX1-203, Transcript of visual system homeobox 1, humanhuman

TSL 1 (best)

Gene VSX1, Length 1,486 nt, Biotype nonsense mediated decay.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
VSX1-203ENST00000409285 BST2Q10589 180 aaKnown RBP21.68■■□□□ 1.06
VSX1-203ENST00000409285 LILRA6Q6PI73 481 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 CCDC170Q8IYT3 715 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 SLC30A5Q8TAD4 765 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 CEP295NLQ96MC4 621 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 NHEJ1Q9H9Q4 299 aaPredicted RBP21.68■■□□□ 1.06
VSX1-203ENST00000409285 PNPLA8Q9NP80 782 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 KRT82Q9NSB4 513 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 ABI2Q9NYB9 513 aaPredicted RBP21.68■■□□□ 1.06
VSX1-203ENST00000409285 CEP83Q9Y592 693 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 PCDHGC5Q9Y5F6 944 aa21.68■■□□□ 1.06
VSX1-203ENST00000409285 M0QYV0 167 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 CYP1A1P04798 512 aaPredicted RBP21.67■■□□□ 1.06
VSX1-203ENST00000409285 POU3F3P20264 500 aaPredicted RBP21.67■■□□□ 1.06
VSX1-203ENST00000409285 ADORA2BP29275 332 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 GPD2P43304 727 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 CLCN4P51793 760 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 ARPP19P56211 112 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 TAF3Q5VWG9 929 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 PPP1R2P3Q6NXS1 205 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 CLEC20AQ6ZU45 233 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 RTL10Q7L3V2 364 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 GLYCTKQ8IVS8 523 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 TCEAL8Q8IYN2 117 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 MED10Q9BTT4 135 aa21.67■■□□□ 1.06
VSX1-203ENST00000409285 CLDN5O00501 218 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 TGM5O43548 720 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 CFHP08603 1231 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 GZMAP12544 262 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 UNGP13051 313 aaPredicted RBP21.66■■□□□ 1.06
VSX1-203ENST00000409285 CA8P35219 290 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 EIF4A3P38919 411 aaKnown RBP21.66■■□□□ 1.06
VSX1-203ENST00000409285 SLC8A3P57103 927 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 ADCY1Q08828 1119 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 SLC18A3Q16572 532 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 ATAD1Q8NBU5 361 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 TMEM35BQ8NCS4 154 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 STK32AQ8WU08 396 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 CCDC42Q96M95 316 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 PGLYRP2Q96PD5 576 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 CDCA3Q99618 268 aaPredicted RBP21.66■■□□□ 1.06
VSX1-203ENST00000409285 UBXN6Q9BZV1 441 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 DMAP1Q9NPF5 467 aaPredicted RBP21.66■■□□□ 1.06
VSX1-203ENST00000409285 MTMR10Q9NXD2 777 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 FBXW11Q9UKB1 542 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 NENFQ9UMX5 172 aa21.66■■□□□ 1.06
VSX1-203ENST00000409285 RFXAPO00287 272 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 DDX3XO00571 662 aaKnown RBP eCLIP21.65■■□□□ 1.06
VSX1-203ENST00000409285 XPO1O14980 1071 aaKnown RBP21.65■■□□□ 1.06
VSX1-203ENST00000409285 AP1G2O75843 785 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 GLUD1P00367 558 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 PTMAP06454 111 aaKnown RBP21.65■■□□□ 1.06
VSX1-203ENST00000409285 TNFAIP3P21580 790 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 BDNFP23560 247 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 KLRC2P26717 231 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 PLA2G4AP47712 749 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 TUFMP49411 452 aaKnown RBP21.65■■□□□ 1.06
VSX1-203ENST00000409285 NOMO3P69849 1222 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 CENPCQ03188 943 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 GRIN2CQ14957 1233 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 DENND1BQ6P3S1 775 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 PALB2Q86YC2 1186 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 HDAC7Q8WUI4 952 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 SLC35F5Q8WV83 523 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 PPP2R3CQ969Q6 453 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 C8orf48Q96LL4 319 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 PCDHB18PQ96TA0 734 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 PDCL3Q9H2J4 239 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 CRISPLD1Q9H336 500 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 CYLDQ9NQC7 956 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 TMEM30AQ9NV96 361 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 ADAMTS1Q9UHI8 967 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 ANAPC1Q9H1A4 1944 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 EYSQ5T1H1 3165 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 C2orf16Q68DN1 1984 aa21.65■■□□□ 1.06
VSX1-203ENST00000409285 A0A087X0T9 212 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 TRIM66O15016 1216 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 NRDCO43847 1150 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 CLASP2O75122 1294 aaKnown RBP21.64■■□□□ 1.06
VSX1-203ENST00000409285 LCA5LO95447 670 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 FAM228BP0C875 321 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 HAPLN1P10915 354 aaPredicted RBP21.64■■□□□ 1.06
VSX1-203ENST00000409285 CYP2F1P24903 491 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 RPL34P49207 117 aaKnown RBP21.64■■□□□ 1.06
VSX1-203ENST00000409285 KIF11P52732 1056 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 CCZ1BP86790 482 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 CCZ1P86791 482 aaPredicted RBP21.64■■□□□ 1.06
VSX1-203ENST00000409285 DUSP6Q16828 381 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 CLEC16AQ2KHT3 1053 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 WDTC1Q8N5D0 677 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 ZMIZ2Q8NF64 920 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 SECISBP2LQ93073 1101 aaKnown RBP21.64■■□□□ 1.06
VSX1-203ENST00000409285 SMOQ99835 787 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 RHOBTB2Q9BYZ6 727 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 DEF6Q9H4E7 631 aa21.64■■□□□ 1.06
VSX1-203ENST00000409285 ARHGAP6O43182 974 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 AKR1B10O60218 316 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 CACNA2D1P54289 1103 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 PDE4CQ08493 712 aa21.64■■□□□ 1.05
VSX1-203ENST00000409285 DUSP4Q13115 394 aa21.64■■□□□ 1.05
Retrieved 100 of 20,778 RNA–protein pairs in 16.9 ms