RNA–Protein interactions for RNA: ENST00000408454.1

SNORD88B-201, Transcript of small nucleolar RNA, C/D box 88B, humanhuman

BASIC

Gene SNORD88B, Length 91 nt, Biotype snoRNA.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SNORD88B-201ENST00000408454 FOXD4L4Q8WXT5 416 aaPredicted RBP13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 IL21Q9HBE4 155 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 TRPC7Q9HCX4 862 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 SLC39A2Q9NP94 309 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 GKN1Q9NS71 199 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 TBC1D14Q9P2M4 693 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 SMG5Q9UPR3 1016 aaKnown RBP13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 SLC8A2Q9UPR5 921 aa13.71□□□□□ -0.21
SNORD88B-201ENST00000408454 TSC2P49815 1807 aa13.71□□□□□ -0.22
SNORD88B-201ENST00000408454 NUP210Q8TEM1 1887 aaPredicted RBP13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 A0A1W2PQ27 194 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 A0A1W2PQ64 194 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 A0A1W2PQD8 194 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 PALM2-AKAP2B1ALY0 433 aaPredicted RBP13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 ARNTLO00327 626 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 TGFB1I1O43294 461 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 AKAP3O75969 853 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 CHRNB1P11230 501 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 HMGA1P17096 107 aaKnown RBP13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 HDCP19113 662 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 ACAT1P24752 427 aaKnown RBP13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 CYP2F1P24903 491 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 NUCB2P80303 420 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 LIMS2Q7Z4I7 341 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 LRRTM3Q86VH5 581 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 UNC93AQ86WB7 457 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 TTC9BQ8N6N2 239 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 B3GALNT2Q8NCR0 500 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 OSCP1Q8WVF1 389 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 DDX1Q92499 740 aaKnown RBP13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 NELL1Q92832 810 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 MYLPFQ96A32 169 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 OTUB2Q96DC9 234 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 SMARCD1Q96GM5 515 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 SLC46A2Q9BY10 475 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 NACA2Q9H009 215 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 FBXO44Q9H4M3 255 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 DMAP1Q9NPF5 467 aaPredicted RBP13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 DUS2Q9NX74 493 aaKnown RBP13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 SIX4Q9UIU6 781 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 ARHGAP26Q9UNA1 814 aa13.7□□□□□ -0.22
SNORD88B-201ENST00000408454 NCANO14594 1321 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 CLIC2O15247 247 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 ZBTB24O43167 697 aaPredicted RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 LILRB5O75023 590 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 SOAT2O75908 522 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 SMC2O95347 1197 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 PFKFB1P16118 471 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 PTPN1P18031 435 aaKnown RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 STIM1Q13586 685 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 NCOA4Q13772 614 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 NFIL3Q16649 462 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 DDR2Q16832 855 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 FOXD4L6Q3SYB3 417 aaPredicted RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 HSF5Q4G112 596 aaPredicted RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 FOXD4L3Q6VB84 417 aaPredicted RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 CEP68Q76N32 757 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 ARHGAP30Q7Z6I6 1101 aaPredicted RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 NUP93Q8N1F7 819 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 ST13P5Q8NFI4 369 aaPredicted RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 OR5B17Q8NGF7 314 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 PAGE5Q96GU1 130 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 PCED1BQ96HM7 432 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 CDK5RAP1Q96SZ6 601 aaKnown RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 TSG101Q99816 390 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 P2RY13Q9BPV8 354 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 MED10Q9BTT4 135 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 TTLL2Q9BWV7 592 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 BLZF1Q9H2G9 400 aa13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 NXF1Q9UBU9 619 aaKnown RBP13.69□□□□□ -0.22
SNORD88B-201ENST00000408454 ANK1P16157 1881 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 TRDMT1O14717 391 aaKnown RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 PRAMEF12O95522 483 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 ADH1CP00326 375 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 NR3C1P04150 777 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 RETP07949 1114 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 BDNFP23560 247 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 YWHAQP27348 245 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 GTF2H1P32780 548 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 PSMC2P35998 433 aaKnown RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 EIF2DP41214 584 aaKnown RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 TUBP50607 506 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 CLDN10P78369 228 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 CUL4BQ13620 913 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 SIM2Q14190 667 aaPredicted RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 MDH1BQ5I0G3 518 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 STXBP5Q5T5C0 1151 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 BTBD8Q5XKL5 378 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 CEP135Q66GS9 1140 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 LMBRD2Q68DH5 695 aaPredicted RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 TXNDC8Q6A555 127 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 GUF1Q8N442 669 aaKnown RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 CXorf38Q8TB03 319 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 PARD3BQ8TEW8 1205 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 USP13Q92995 863 aaPredicted RBP13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 LOXL4Q96JB6 756 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 PKMYT1Q99640 499 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 FAM83CQ9BQN1 747 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 MKNK1Q9BUB5 465 aa13.68□□□□□ -0.22
SNORD88B-201ENST00000408454 CYP3A43Q9HB55 503 aa13.68□□□□□ -0.22
Retrieved 100 of 20,778 RNA–protein pairs in 57.4 ms