RNA–Protein interactions for RNA: ENST00000406134.5

MSH2-202, Transcript of mutS homolog 2, humanhuman

TSL 1 (best) BASIC

Gene MSH2, Length 3,628 nt, Biotype protein coding, Subcellular localisation Cytosol .

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
MSH2-202ENST00000406134 CXCL16Q9H2A7 254 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 SMYD3Q9H7B4 428 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 FETUBQ9UGM5 382 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 EFR3BQ9Y2G0 817 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 LRRD1A4D1F6 860 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 POC1B-GALNT4F8VUJ3 575 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 NFICP08651 508 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 ETV4P43268 484 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 SGSM1Q2NKQ1 1148 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 DCAF15Q66K64 600 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 PPP1R21Q6ZMI0 780 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 ERICH1Q86X53 443 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 BANPQ8N9N5 519 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 CHST13Q8NET6 341 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 ZNF668Q96K58 619 aaPredicted RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 TTC25Q96NG3 672 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 KCNK13Q9HB14 408 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 SSU72Q9NP77 194 aaKnown RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 PICK1Q9NRD5 415 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 SLC17A7Q9P2U7 560 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 NKX1-2Q9UD57 310 aaPredicted RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 LTBP3Q9NS15 1303 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 GABBR2O75899 941 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 PRKCBP05771 671 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 DHRS4L1P0CG22 281 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 IL4RP24394 825 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 SSR1P43307 286 aaKnown RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 LMNB2Q03252 620 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 MMRN1Q13201 1228 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 HSF5Q4G112 596 aaPredicted RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 MAP1SQ66K74 1059 aaPredicted RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 NPNTQ6UXI9 565 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 RIOX2Q8IUF8 465 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 TMEM35BQ8NCS4 154 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 CCHCR1Q8TD31 782 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 MCRS1Q96EZ8 462 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 PRR11Q96HE9 360 aaPredicted RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 MRPL4Q9BYD3 311 aaKnown RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 LRMDAQ9H2I8 198 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 IFT122Q9HBG6 1241 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 DDX56Q9NY93 547 aaKnown RBP10.34□□□□□ -0.75
MSH2-202ENST00000406134 SLC24A2Q9UI40 661 aa10.34□□□□□ -0.75
MSH2-202ENST00000406134 GPR25O00155 361 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 CXCL8P10145 99 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 MSH2P43246 934 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 AP3M2P53677 418 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 DYNLT1P63172 113 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 RNASELQ05823 741 aaKnown RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 KCNJ11Q14654 390 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 DALRD3Q5D0E6 543 aaKnown RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 PPP1R2P3Q6NXS1 205 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 PITPNM3Q9BZ71 974 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 CDT1Q9H211 546 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 ACSS3Q9H6R3 686 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 ZWILCHQ9H900 591 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 METTL5Q9NRN9 209 aaKnown RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 BAIAP2L1Q9UHR4 511 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 EPB41L3Q9Y2J2 1087 aaPredicted RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 HGSO14964 777 aaPredicted RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 CST8O60676 142 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 ADRA1DP25100 572 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 MARK3P27448 753 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 GPD2P43304 727 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 VGLL4Q14135 290 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 METTL7BQ6UX53 244 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 ANKRD35Q8N283 1001 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 LINC01465Q8N7H1 131 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 RNF149Q8NC42 400 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 JDP2Q8WYK2 163 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 CNTN3Q9P232 1028 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 PSMC3IPQ9P2W1 217 aaPredicted RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 FNDC1Q4ZHG4 1894 aaPredicted RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 SGK1O00141 431 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 SRGAP2CP0DJJ0 459 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 GNAZP19086 355 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 NEK3P51956 506 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 GEMIN4P57678 1058 aaKnown RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 TAP1Q03518 808 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 DUOXA2Q1HG44 320 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 ZNF699Q32M78 642 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 CCDC62Q6P9F0 684 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 MPZL3Q6UWV2 235 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 PPIL6Q8IXY8 311 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 GBP7Q8N8V2 638 aaPredicted RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 FBXO36Q8NEA4 188 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 RFWD2Q8NHY2 731 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 ZNF75CPQ92670 426 aaPredicted RBP10.33□□□□□ -0.76
MSH2-202ENST00000406134 KHSRPQ92945 711 aaKnown RBP eCLIP10.33□□□□□ -0.766e-6■■■■□ 21.5
MSH2-202ENST00000406134 SERAC1Q96JX3 654 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 MIPEPQ99797 713 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 CXorf56Q9H5V9 222 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 TXNRD2Q9NNW7 524 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 TEX264Q9Y6I9 313 aa10.33□□□□□ -0.76
MSH2-202ENST00000406134 CILPO75339 1184 aa10.32□□□□□ -0.76
MSH2-202ENST00000406134 TRUB2O95900 331 aaKnown RBP10.32□□□□□ -0.76
MSH2-202ENST00000406134 KRT4P19013 534 aa10.32□□□□□ -0.76
MSH2-202ENST00000406134 TARSP26639 723 aaKnown RBP10.32□□□□□ -0.76
MSH2-202ENST00000406134 MIPP30301 263 aa10.32□□□□□ -0.76
MSH2-202ENST00000406134 MAP2K2P36507 400 aa10.32□□□□□ -0.76
MSH2-202ENST00000406134 CCNG1P51959 295 aa10.32□□□□□ -0.76
Retrieved 100 of 20,778 RNA–protein pairs in 36.1 ms