RNA–Protein interactions for RNA: ENST00000405578.8

RPAIN-204, Transcript of RPA interacting protein, humanhuman

TSL 2 BASIC

Gene RPAIN, Length 1,083 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
RPAIN-204ENST00000405578 OR1D2P34982 312 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 ARPP19P56211 112 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 GCNT1Q02742 428 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 CUL2Q13617 745 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 MRPL58Q14197 206 aaKnown RBP11.24□□□□□ -0.61
RPAIN-204ENST00000405578 MAPRE1Q15691 268 aaKnown RBP11.24□□□□□ -0.61
RPAIN-204ENST00000405578 ZNF528Q3MIS6 628 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 PPM1JQ5JR12 505 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 TPGS2Q68CL5 300 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 SPOPLQ6IQ16 392 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 SLC8B1Q6J4K2 584 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 LIMS2Q7Z4I7 341 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 UNC93AQ86WB7 457 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 ST13P5Q8NFI4 369 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-204ENST00000405578 CMASQ8NFW8 434 aaPredicted RBP11.24□□□□□ -0.61
RPAIN-204ENST00000405578 ATRIPQ8WXE1 791 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 NXPE3Q969Y0 559 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 JAKMIP2Q96AA8 810 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 ACBD6Q9BR61 282 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 HSD3B7Q9H2F3 369 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 PARD6AQ9NPB6 346 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 APEX2Q9UBZ4 518 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 FBXL5Q9UKA1 691 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 MAFFQ9ULX9 164 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 POLIQ9UNA4 740 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 DAAM1Q9Y4D1 1078 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 PCDHGA2Q9Y5H1 932 aa11.24□□□□□ -0.61
RPAIN-204ENST00000405578 TDRD15B5MCY1 1934 aaKnown RBP11.23□□□□□ -0.61
RPAIN-204ENST00000405578 CCDC195A0A1B0GUA6 201 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 GABRDO14764 452 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 RPL17P18621 184 aaKnown RBP11.23□□□□□ -0.61
RPAIN-204ENST00000405578 TGM1P22735 817 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 PON1P27169 355 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 ASPAP45381 313 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 MFAP3P55082 362 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 UBASH3AP57075 661 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 FANCCQ00597 558 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 CSTF1Q05048 431 aaKnown RBP11.23□□□□□ -0.61
RPAIN-204ENST00000405578 RAB33AQ14088 237 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 NFE2Q16621 373 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-204ENST00000405578 LIN9Q5TKA1 542 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 SCARA3Q6AZY7 606 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 SMYD5Q6GMV2 418 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 TRIM65Q6PJ69 517 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 GET4Q7L5D6 327 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-204ENST00000405578 CLSTN3Q9BQT9 956 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 NT5C1AQ9BXI3 368 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 BCO2Q9BYV7 579 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 EPC1Q9H2F5 836 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 SMYD3Q9H7B4 428 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 APOBEC3GQ9HC16 384 aaKnown RBP11.23□□□□□ -0.61
RPAIN-204ENST00000405578 UBE2TQ9NPD8 197 aaPredicted RBP11.23□□□□□ -0.61
RPAIN-204ENST00000405578 SLC2A4RGQ9NR83 387 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 FBXO4Q9UKT5 387 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 CDH9Q9ULB4 789 aa11.23□□□□□ -0.61
RPAIN-204ENST00000405578 TBC1D4O60343 1298 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 RFPL2O75678 378 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 PDGFRBP09619 1106 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 CD58P19256 250 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 SLC9A1P19634 815 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 RAP1GAPP47736 663 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 CDH8P55286 799 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 STARD6P59095 220 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 PLCB2Q00722 1185 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 ROR1Q01973 937 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 GPR17Q13304 367 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 HTR4Q13639 388 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 UBXN2BQ14CS0 331 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 SYCP1Q15431 976 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 C4orf50Q6ZRC1 276 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 RTL10Q7L3V2 364 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 RRAGAQ7L523 313 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 PALB2Q86YC2 1186 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 GLYCTKQ8IVS8 523 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 ZBTB44Q8NCP5 570 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 NEK11Q8NG66 645 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 ZNF461Q8TAF7 563 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 LMO3Q8TAP4 145 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 C2orf15Q8WU43 125 aaKnown RBP11.22□□□□□ -0.61
RPAIN-204ENST00000405578 HDAC7Q8WUI4 952 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 KBTBD7Q8WVZ9 684 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 SMG7Q92540 1137 aaKnown RBP11.22□□□□□ -0.61
RPAIN-204ENST00000405578 TATDN2Q93075 761 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 SYT15Q9BQS2 421 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 MRPL45Q9BRJ2 306 aaKnown RBP11.22□□□□□ -0.61
RPAIN-204ENST00000405578 LSM14BQ9BX40 385 aaKnown RBP11.22□□□□□ -0.61
RPAIN-204ENST00000405578 ZCWPW1Q9H0M4 648 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 PLEKHA4Q9H4M7 779 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 PLCB1Q9NQ66 1216 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 RTN4Q9NQC3 1192 aaKnown RBP11.22□□□□□ -0.61
RPAIN-204ENST00000405578 CISHQ9NSE2 258 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 ZSCAN32Q9NX65 697 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 AFF4Q9UHB7 1163 aaKnown RBP11.22□□□□□ -0.61
RPAIN-204ENST00000405578 GMEB2Q9UKD1 530 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 NUMBLQ9Y6R0 609 aa11.22□□□□□ -0.61
RPAIN-204ENST00000405578 CITO14578 2027 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 ATP8B3O60423 1300 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 A0A1B0GTH6 734 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 A0A1W2PQC6 194 aa11.21□□□□□ -0.61
RPAIN-204ENST00000405578 KANSL1LA0AUZ9 987 aa11.21□□□□□ -0.61
Retrieved 100 of 20,778 RNA–protein pairs in 13.2 ms