RNA–Protein interactions for RNA: ENST00000405375.5

CDKN1A-203, Transcript of cyclin dependent kinase inhibitor 1A, humanhuman

APPRIS P1 TSL 1 (best) BASIC

Gene CDKN1A, Length 2,267 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CDKN1A-203ENST00000405375 MLXIPLQ9NP71 852 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 COL1A2P08123 1366 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 RBM47A0AV96 593 aaKnown RBP17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 M0QYV0 167 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 RASSF9O75901 435 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 VDRP11473 427 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 P4HA1P13674 534 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 MIPP30301 263 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 TMEM132DQ14C87 1099 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 KYAT1Q16773 422 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 MAP1SQ66K74 1059 aaPredicted RBP17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 AFG1LQ8WV93 481 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 FGFR1OP2Q9NVK5 253 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 C2CD2Q9Y426 696 aa17.05■□□□□ 0.32
CDKN1A-203ENST00000405375 RASA4BC9J798 803 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 RASA4O43374 803 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 ZNF286BP0CG31 522 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 TAF5Q15542 800 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 CENPUQ71F23 418 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 TRABD2AQ86V40 505 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 ZBED8Q8IZ13 594 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 ZC3H15Q8WU90 426 aaKnown RBP17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 PHACTR1Q9C0D0 580 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 VTA1Q9NP79 307 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 PCSK1NQ9UHG2 260 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 ITGA11Q9UKX5 1188 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 BARX2Q9UMQ3 279 aaPredicted RBP17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 AGAP1Q9UPQ3 857 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 PLXNA1Q9UIW2 1896 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 TSPAN1O60635 241 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 STAU1O95793 577 aaKnown RBP17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 TRUB2O95900 331 aaKnown RBP17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 CYP3A5P20815 502 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 NR1H3Q13133 447 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 SNAPC2Q13487 334 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 TMED2Q15363 201 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 HP1BP3Q5SSJ5 553 aaPredicted RBP17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 MTHFD1LQ6UB35 978 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 ARHGEF18Q6ZSZ5 1173 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 PCGF5Q86SE9 256 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 TAX1BP1Q86VP1 789 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 CPT1BQ92523 772 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 HEXIM2Q96MH2 286 aaKnown RBP17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 KATNBL1Q9H079 304 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 FAM124BQ9H5Z6 455 aaPredicted RBP17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 C10orf88Q9H8K7 445 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 USP18Q9UMW8 372 aa17.04■□□□□ 0.32
CDKN1A-203ENST00000405375 A0A1B0GUA9 196 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 ADORA2AP29274 412 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 PCK1P35558 622 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 CTCFP49711 727 aaPredicted RBP17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 ZNF143P52747 638 aaPredicted RBP17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 SF3A3Q12874 501 aaKnown RBP eCLIP17.03■□□□□ 0.322e-12■■■■■ 28.1
CDKN1A-203ENST00000405375 PDIA2Q13087 525 aaKnown RBP17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 LDLRAD1Q5T700 205 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 C9orf131Q5VYM1 1079 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 NUGGCQ68CJ6 796 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 USP50Q70EL3 339 aaPredicted RBP17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 NAT8LQ8N9F0 302 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 GPRC5AQ8NFJ5 357 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 GDAP1Q8TB36 358 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 APOC4-APOC2K7ER74 178 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 RNF8O76064 485 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 ENDOD1O94919 500 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 APOC2P02655 101 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 NDST1P52848 882 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 RBP5P82980 135 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 GAD2Q05329 585 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 RASA2Q15283 850 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 HIF1AQ16665 826 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 FAM102AQ5T9C2 384 aaPredicted RBP17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 ANKRD22Q5VYY1 191 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 TRNP1Q6NT89 227 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 LCLAT1Q6UWP7 414 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 PPP1R21Q6ZMI0 780 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 CYP4V2Q6ZWL3 525 aaPredicted RBP17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 TRPM8Q7Z2W7 1104 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 SUGP1Q8IWZ8 645 aaKnown RBP17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 PPIL6Q8IXY8 311 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 KCTD6Q8NC69 237 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 UBA3Q8TBC4 463 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 MAGEB18Q96M61 343 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 PEBP4Q96S96 227 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 ADPGKQ9BRR6 497 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 UBN1Q9NPG3 1134 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 NKIRAS1Q9NYS0 192 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 SLC12A4Q9UP95 1085 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 USP15Q9Y4E8 981 aaPredicted RBP17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 CITO14578 2027 aa17.03■□□□□ 0.32
CDKN1A-203ENST00000405375 STX2P32856 288 aa17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 RPL22P35268 128 aaKnown RBP17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 ADCYAP1R1P41586 468 aa17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 GPX6P59796 221 aa17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 NT5DC4Q86YG4 428 aa17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 GTF3C2Q8WUA4 911 aaPredicted RBP17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 SGSM3Q96HU1 749 aa17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 ACAP3Q96P50 834 aa17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 VPS37BQ9H9H4 285 aa17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 SLC40A1Q9NP59 571 aa17.02■□□□□ 0.32
CDKN1A-203ENST00000405375 DPP3Q9NY33 737 aa17.02■□□□□ 0.32
Retrieved 100 of 20,778 RNA–protein pairs in 12.6 ms