RNA–Protein interactions for RNA: ENST00000404354.3

SMC1B-202, Transcript of structural maintenance of chromosomes 1B, humanhuman

TSL 1 (best) BASIC

Gene SMC1B, Length 3,636 nt, Biotype protein coding.

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SMC1B-202ENST00000404354 ASTN2O75129 1339 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 COPEO14579 308 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 LYPLA1O75608 230 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TOM1L1O75674 476 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 C6orf222P0C671 652 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 CD19P15391 556 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 SERPINB6P35237 376 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 VCPP55072 806 aaKnown RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 OSTNP61366 133 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TCHHL1Q5QJ38 904 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 MROH9Q5TGP6 573 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 CES4AQ5XG92 561 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 C16orf46Q6P387 395 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 MTHFD1LQ6UB35 978 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 PDIK1LQ8N165 341 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 OR5B17Q8NGF7 314 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 GATA6Q92908 595 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TMEM143Q96AN5 459 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TAAR1Q96RJ0 339 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 C20orf27Q9GZN8 174 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 MRPL47Q9HD33 250 aaKnown RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ETNK2Q9NVF9 386 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 RHBDL2Q9NX52 303 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 NUB1Q9Y5A7 615 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 UBE4BO95155 1302 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TRAFD1O14545 582 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 SLC26A4O43511 780 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 CIB2O75838 187 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ABHD2P08910 425 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 POTEJP0CG39 1038 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 RARBP10826 455 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 PHBP35232 272 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 LIG4P49917 911 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 OCRLQ01968 901 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 MMRN1Q13201 1228 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TCEAL1Q15170 157 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 EML3Q32P44 896 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 LRRC23Q53EV4 343 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ARHGAP22Q7Z5H3 698 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 CDR2LQ86X02 465 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 PPP1R14CQ8TAE6 165 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 GMCL1Q96IK5 515 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 SRPK1Q96SB4 655 aaKnown RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ASCC2Q9H1I8 757 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 DDX18Q9NVP1 670 aaKnown RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 LNPEPQ9UIQ6 1025 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ZBTB12Q9Y330 459 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 NR2E3Q9Y5X4 410 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TCRBV9S1A1TA0A576 114 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 CXorf49A8MYA2 514 aaPredicted RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 PSTPIP1O43586 416 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 CCNE2O96020 404 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 MRPS9P82933 396 aaKnown RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 MORF4L2Q15014 288 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 LARP7Q4G0J3 582 aaKnown RBP eCLIP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 RAB6CQ53S08 254 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 EFHC2Q5JST6 749 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 C1orf228Q6PIY5 440 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 C15orf52Q6ZUT6 534 aaKnown RBP10.01□□□□□ -0.81
SMC1B-202ENST00000404354 DENND5BQ6ZUT9 1274 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ANO5Q75V66 913 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ZBTB33Q86T24 672 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 SATL1Q86VE3 508 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 RFX6Q8HWS3 928 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ULK2Q8IYT8 1036 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ABRAQ8N0Z2 381 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 GPD1LQ8N335 351 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TTLL6Q8N841 843 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 NETO2Q8NC67 525 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 DCAKDQ8WVC6 231 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ZNF606Q8WXB4 792 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 TCHPQ9BT92 498 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 RAB6CQ9H0N0 254 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 ARHGEF4Q9NR80 690 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 SENP1Q9P0U3 644 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 SLC17A6Q9P2U8 582 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 GABBR1Q9UBS5 961 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 MAD1L1Q9Y6D9 718 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 SLC4A7Q9Y6M7 1214 aa10.01□□□□□ -0.81
SMC1B-202ENST00000404354 DHX15O43143 795 aaKnown RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 ECE2O60344 883 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 ATP6V1B1P15313 513 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 RFC1P35251 1148 aaPredicted RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 DSG1Q02413 1049 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 ASPHQ12797 758 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 CDC16Q13042 620 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 CDO1Q16878 200 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 GRAMD1BQ3KR37 738 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 TKFCQ3LXA3 575 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 MTERF2Q49AM1 385 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 HSF5Q4G112 596 aaPredicted RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 PAOXQ6QHF9 649 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 RCOR2Q8IZ40 523 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 SKA1Q96BD8 255 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 MRPL11Q9Y3B7 192 aaKnown RBP10□□□□□ -0.81
SMC1B-202ENST00000404354 LTBP4Q8N2S1 1624 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 I3L4J1 428 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 GRAP2O75791 330 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 LMNB2Q03252 620 aa10□□□□□ -0.81
SMC1B-202ENST00000404354 NCOA4Q13772 614 aa10□□□□□ -0.81
Retrieved 100 of 20,778 RNA–protein pairs in 15.7 ms