RNA–Protein interactions for RNA: ENST00000403997.2

SDF4-203, Transcript of stromal cell derived factor 4, humanhuman

TSL 3

Gene SDF4, Length 728 nt, Biotype protein coding, Subcellular localisation Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
SDF4-203ENST00000403997 DPEP3Q9H4B8 488 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 SMYD3Q9H7B4 428 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 C8orf33Q9H7E9 229 aaPredicted RBP14.2□□□□□ -0.14
SDF4-203ENST00000403997 VRTNQ9H8Y1 702 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 LMAN1LQ9HAT1 526 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 TRPC7Q9HCX4 862 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 GKN1Q9NS71 199 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 TDP1Q9NUW8 608 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 NME7Q9Y5B8 376 aa14.2□□□□□ -0.14
SDF4-203ENST00000403997 PTPRZ1P23471 2315 aaPredicted RBP14.2□□□□□ -0.14
SDF4-203ENST00000403997 SOBPA7XYQ1 873 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 IKBKBO14920 756 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 TRIM66O15016 1216 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 P4HA1P13674 534 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 RPS9P46781 194 aaKnown RBP14.19□□□□□ -0.14
SDF4-203ENST00000403997 RAP1GAPP47736 663 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 MLLT6P55198 1093 aaPredicted RBP14.19□□□□□ -0.14
SDF4-203ENST00000403997 PLCB2Q00722 1185 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 ADAM9Q13443 819 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 FZD5Q13467 585 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 PNOCQ13519 176 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 NFIL3Q16649 462 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 SGSM1Q2NKQ1 1148 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 ZACNQ401N2 412 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 SCARA5Q6ZMJ2 495 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 SV2AQ7L0J3 742 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 ASCL5Q7RTU5 278 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 B3GALNT2Q8NCR0 500 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 USP13Q92995 863 aaPredicted RBP14.19□□□□□ -0.14
SDF4-203ENST00000403997 GTSE1Q9NYZ3 720 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 CCL26Q9Y258 94 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 MIA3Q5JRA6 1907 aa14.19□□□□□ -0.14
SDF4-203ENST00000403997 ZFHX2Q9C0A1 2572 aaPredicted RBP14.18□□□□□ -0.14
SDF4-203ENST00000403997 TRAV19A0A0A6YYK7 116 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 F8VP50 259 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 CLDN5O00501 218 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 MAPK13O15264 365 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 TADA3O75528 432 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 AKAP3O75969 853 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 KRT13P13646 458 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 PSMC2P35998 433 aaKnown RBP14.18□□□□□ -0.14
SDF4-203ENST00000403997 SOX9P48436 509 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 CSTF1Q05048 431 aaKnown RBP14.18□□□□□ -0.14
SDF4-203ENST00000403997 TNK2Q07912 1038 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 C1orf220Q5T0J3 134 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 CC2D1AQ6P1N0 951 aaPredicted RBP14.18□□□□□ -0.14
SDF4-203ENST00000403997 C1orf228Q6PIY5 440 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 DENND5BQ6ZUT9 1274 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 INTS8Q75QN2 995 aaKnown RBP14.18□□□□□ -0.14
SDF4-203ENST00000403997 FAM186BQ8IYM0 893 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 SMYD4Q8IYR2 804 aaPredicted RBP14.18□□□□□ -0.14
SDF4-203ENST00000403997 MAML2Q8IZL2 1156 aaPredicted RBP14.18□□□□□ -0.14
SDF4-203ENST00000403997 ZNF687Q8N1G0 1237 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 TTC16Q8NEE8 873 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 MSANTD3Q96H12 275 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 CEP295NLQ96MC4 621 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 CYP2S1Q96SQ9 504 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 B3GNT5Q9BYG0 378 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 UTP3Q9NQZ2 479 aaKnown RBP eCLIP14.18□□□□□ -0.142e-7■■■■■ 52.5
SDF4-203ENST00000403997 RMND1Q9NWS8 449 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 EHD2Q9NZN4 543 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 R4GN57 208 aa14.18□□□□□ -0.14
SDF4-203ENST00000403997 PRR23AA6NEV1 266 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 SPECC1L-ADORA2AF8WAN1 911 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 SMC2O95347 1197 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 HLA-DRAP01903 254 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 CKMP06732 381 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 USP17L7P0C7H9 530 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 TRIM49P0CI25 452 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 TRIM49CP0CI26 452 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 HDCP19113 662 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 CTHP32929 405 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 PIK3CAP42336 1068 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 GCLMP48507 274 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 MTAPQ13126 283 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 ITPRIPL2Q3MIP1 535 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 ZC3H14Q6PJT7 736 aaKnown RBP14.17□□□□□ -0.14
SDF4-203ENST00000403997 RALGPS2Q86X27 583 aaPredicted RBP14.17□□□□□ -0.14
SDF4-203ENST00000403997 ARL14EPQ8N8R7 260 aaPredicted RBP14.17□□□□□ -0.14
SDF4-203ENST00000403997 ENGASEQ8NFI3 743 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 TAF4BQ92750 862 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 TNIP3Q96KP6 325 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 C8orf48Q96LL4 319 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 MED10Q9BTT4 135 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 ZNF518BQ9C0D4 1074 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 ELOVL4Q9GZR5 314 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 SDCBP2Q9H190 292 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 SEMA4AQ9H3S1 761 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 MMRN2Q9H8L6 949 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 KIF9Q9HAQ2 790 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 FBXO4Q9UKT5 387 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 TICRRQ7Z2Z1 1910 aa14.17□□□□□ -0.14
SDF4-203ENST00000403997 C2orf78A6NCI8 922 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 ABL1P00519 1130 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 CHRNB1P11230 501 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 PRCPP42785 496 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 CACNA2D1P54289 1103 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 USP46P62068 366 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 FAM160A1Q05DH4 1040 aa14.16□□□□□ -0.14
SDF4-203ENST00000403997 PPP3CAQ08209 521 aa14.16□□□□□ -0.14
Retrieved 100 of 20,778 RNA–protein pairs in 18.1 ms