RNA–Protein interactions for RNA: ENST00000403994.7

TPM1-207, Transcript of tropomyosin 1, humanhuman

APPRIS ALT1 TSL 1 (best) BASIC

Gene TPM1, Length 1,049 nt, Biotype protein coding, Subcellular localisation Cytosol, Nucleus, Ribosome .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
TPM1-207ENST00000403994 NDUFA8P51970 172 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 MYL6P60660 151 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 PSMD2Q13200 908 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 WDR72Q3MJ13 1102 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 MDH1BQ5I0G3 518 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 TSSK4Q6SA08 328 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 VSTM1Q6UX27 236 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 MON1AQ86VX9 555 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 RALGPS2Q86X27 583 aaPredicted RBP16.42■□□□□ 0.22
TPM1-207ENST00000403994 SLC9A9Q8IVB4 645 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 PCED1BQ96HM7 432 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 SNX25Q9H3E2 840 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 TRPC7Q9HCX4 862 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 TDP1Q9NUW8 608 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 DMAC2Q9NW81 257 aa16.42■□□□□ 0.22
TPM1-207ENST00000403994 SOBPA7XYQ1 873 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 NR3C1P04150 777 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 RPN1P04843 607 aaKnown RBP16.41■□□□□ 0.22
TPM1-207ENST00000403994 SYKP43405 635 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 CLDN10P78369 228 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 CYP27A1Q02318 531 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 USP4Q13107 963 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 TRPC3Q13507 836 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 LRRC32Q14392 662 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 ZNF268Q14587 947 aaPredicted RBP16.41■□□□□ 0.22
TPM1-207ENST00000403994 ITPRIPL2Q3MIP1 535 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 ZBTB44Q8NCP5 570 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 MYCBPAPQ8TBZ2 947 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 PARD3BQ8TEW8 1205 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 TMEM174Q8WUU8 243 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 SYAP1Q96A49 352 aaPredicted RBP16.41■□□□□ 0.22
TPM1-207ENST00000403994 SPATA17Q96L03 361 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 SLC22A12Q96S37 553 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 FAM83CQ9BQN1 747 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 GOLPH3LQ9H4A5 285 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 DPEP3Q9H4B8 488 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 SMYD3Q9H7B4 428 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 LMAN1LQ9HAT1 526 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 HPS4Q9NQG7 708 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 RBM12Q9NTZ6 932 aaKnown RBP16.41■□□□□ 0.22
TPM1-207ENST00000403994 THG1LQ9NWX6 298 aaKnown RBP16.41■□□□□ 0.22
TPM1-207ENST00000403994 ZSCAN32Q9NX65 697 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 MAGEC2Q9UBF1 373 aaPredicted RBP16.41■□□□□ 0.22
TPM1-207ENST00000403994 MYO16Q9Y6X6 1858 aa16.41■□□□□ 0.22
TPM1-207ENST00000403994 PDXKO00764 312 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 ATICP31939 592 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 GNL1P36915 607 aaPredicted RBP16.4■□□□□ 0.22
TPM1-207ENST00000403994 USP46P62068 366 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 BIRC3Q13489 604 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 GAS6Q14393 721 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 PON2Q15165 354 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 ZNF699Q32M78 642 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 TRIM68Q6AZZ1 485 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 SCARA5Q6ZMJ2 495 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 MAMSTRQ6ZN01 415 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 Q6ZS52 159 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 FSIP1Q8NA03 581 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 SUMF1Q8NBK3 374 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 OR6B3Q8NGW1 331 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 CEP295NLQ96MC4 621 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 SCAND2PQ9GZW5 306 aaPredicted RBP16.4■□□□□ 0.22
TPM1-207ENST00000403994 VRTNQ9H8Y1 702 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 TMEM30AQ9NV96 361 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 NXF1Q9UBU9 619 aaKnown RBP16.4■□□□□ 0.22
TPM1-207ENST00000403994 ATP6V1DQ9Y5K8 247 aa16.4■□□□□ 0.22
TPM1-207ENST00000403994 TRAV19A0A0A6YYK7 116 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 A0A1W2PQ27 194 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 A0A1W2PQ64 194 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 A0A1W2PQD8 194 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 C2orf78A6NCI8 922 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 F8VP50 259 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 TRIM66O15016 1216 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 LILRB5O75023 590 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 PHACTR2O75167 634 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 VNN1O95497 513 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 CKMP06732 381 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 ANXA13P27216 316 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 GRIK1P39086 918 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 CCR3P51677 355 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 AP3M2P53677 418 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 CACNA2D1P54289 1103 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 SATB1Q01826 763 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 FAM160A1Q05DH4 1040 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 DPYDQ12882 1025 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 NCOA4Q13772 614 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 CCINQ13939 588 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 ZNF77Q15935 545 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 DENND5BQ6ZUT9 1274 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 B3GALNT2Q8NCR0 500 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 ATRIPQ8WXE1 791 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 CHFRQ96EP1 664 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 TTLL2Q9BWV7 592 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 FAM126AQ9BYI3 521 aaPredicted RBP16.39■□□□□ 0.21
TPM1-207ENST00000403994 EBF3Q9H4W6 596 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 GKN1Q9NS71 199 aa16.39■□□□□ 0.21
TPM1-207ENST00000403994 OTOL1A6NHN0 477 aaPredicted RBP16.38■□□□□ 0.21
TPM1-207ENST00000403994 RHOBTB3O94955 611 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 CLSTN1O94985 981 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 FAM163BP0C2L3 166 aa16.38■□□□□ 0.21
TPM1-207ENST00000403994 USP17L7P0C7H9 530 aa16.38■□□□□ 0.21
Retrieved 100 of 20,778 RNA–protein pairs in 33.6 ms