RNA–Protein interactions for RNA: ENST00000402555.2

HMGB1P20-201, Transcript of high mobility group box 1 pseudogene 20, humanhuman

BASIC

Gene HMGB1P20, Length 677 nt, Biotype processed pseudogene.

Download Table  
RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
HMGB1P20-201ENST00000402555 ARHGEF3Q9NR81 526 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 SLC2A4RGQ9NR83 387 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 DMAC2Q9NW81 257 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 GDAP2Q9NXN4 497 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 GDE1Q9NZC3 331 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 CGNQ9P2M7 1197 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 NXF1Q9UBU9 619 aaKnown RBP6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 WNT16Q9UBV4 365 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 PCDHB5Q9Y5E4 795 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 GVINP1Q7Z2Y8 2422 aa6.18□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM186AA6NE01 2351 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 GPR179Q6PRD1 2367 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 GOLGA6L4A6NEF3 574 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 H0Y858 1186 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 PDXKO00764 312 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 GABRDO14764 452 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 GADD45BO75293 160 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 ECI2O75521 394 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 WFS1O76024 890 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 MICAL2O94851 1124 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 VNN1O95497 513 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 DCNP07585 359 aaKnown RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRIM49P0CI25 452 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRIM49CP0CI26 452 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SNRPBP14678 240 aaKnown RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 AOC1P19801 751 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 RFX1P22670 979 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 WARSP23381 471 aaKnown RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 PCSK1P29120 753 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 RAP1GAPP47736 663 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 LHX1P48742 406 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 TUFMP49411 452 aaKnown RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 CLCN5P51795 746 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 VEPH1Q14D04 833 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 TAF12Q16514 161 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 NFE2Q16621 373 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 WDR72Q3MJ13 1102 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SLC44A4Q53GD3 710 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 MDH1BQ5I0G3 518 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 C1orf220Q5T0J3 134 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 GPR158Q5T848 1215 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 VITQ6UXI7 678 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SCARA5Q6ZMJ2 495 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 LIMS2Q7Z4I7 341 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 TMEM150AQ86TG1 271 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 ITIH5Q86UX2 942 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SPATA2LQ8IUW3 424 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SLC9A9Q8IVB4 645 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SCN4BQ8IWT1 228 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 FMR1NBQ8N0W7 255 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 LEMD2Q8NC56 503 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 ENGASEQ8NFI3 743 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 OR6B3Q8NGW1 331 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 GOLGA5Q8TBA6 731 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SPPL2BQ8TCT7 592 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 PARD3BQ8TEW8 1205 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 C2orf15Q8WU43 125 aaKnown RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SMARCD2Q92925 531 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 MYLPFQ96A32 169 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 ELSPBP1Q96BH3 223 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 EEF2KMTQ96G04 330 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 ACBD6Q9BR61 282 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 MKNK1Q9BUB5 465 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SMG9Q9H0W8 520 aaKnown RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 XYLT2Q9H1B5 865 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 DPEP3Q9H4B8 488 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 ZFP14Q9HCL3 533 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 CRTAC1Q9NQ79 661 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 HSFX1Q9UBD0 423 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 MAGED2Q9UNF1 606 aaPredicted RBP6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 TRAF3IP3Q9Y228 551 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 ASB3Q9Y575 518 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 SPTBN4Q9H254 2564 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 VPS13AQ96RL7 3174 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 TICRRQ7Z2Z1 1910 aa6.17□□□□□ -1.42
HMGB1P20-201ENST00000402555 OBSL1O75147 1896 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 SLC38A8A6NNN8 435 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 HEPACAM2A8MVW5 462 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 CALUO43852 315 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 AKAP3O75969 853 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 PRAMEF12O95522 483 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 F11P03951 625 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 C4BPAP04003 597 aaKnown RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 HMGA1P17096 107 aaKnown RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 BDNFP23560 247 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 NR2F2P24468 414 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 GDI1P31150 447 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 GNL1P36915 607 aaPredicted RBP6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 GCLMP48507 274 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 VAMP7P51809 220 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 CDH8P55286 799 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 NLRP12P59046 1061 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 TNNC1P63316 161 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 CYP27A1Q02318 531 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 FAM160A1Q05DH4 1040 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 ORC1Q13415 861 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 NCOA4Q13772 614 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 KCNB1Q14721 858 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 UBXN2BQ14CS0 331 aa6.16□□□□□ -1.42
HMGB1P20-201ENST00000402555 MLF2Q15773 248 aaPredicted RBP6.16□□□□□ -1.42
Retrieved 100 of 20,778 RNA–protein pairs in 27.8 ms