RNA–Protein interactions for RNA: ENST00000401522.7

CHRFAM7A-203, Transcript of CHRNA7 (exons 5-10) and FAM7A (exons A-E) fusion, humanhuman

TSL 1 (best) BASIC

Gene CHRFAM7A, Length 1,913 nt, Biotype protein coding, Subcellular localisation Nucleus .

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RNA Protein Prediction (catRAPID) Interaction (ENCODE eCLIP)
Transcript Symbol Ensembl Transcript ID Gene UniProt Accession Length Protein Status Prediction Score Prediction z-Score p-Value Fold Change
CHRFAM7A-203ENST00000401522 FAM43BQ6ZT52 329 aaPredicted RBP16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 MON1BQ7L1V2 547 aa16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ATL2Q8NHH9 583 aa16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CPA5Q8WXQ8 436 aa16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TRIM43Q96BQ3 446 aaPredicted RBP16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 SLC40A1Q9NP59 571 aa16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CHST12Q9NRB3 414 aa16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CHST7Q9NS84 486 aa16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 SAMD15Q9P1V8 674 aa16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 PADI3Q9ULW8 664 aa16.8■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ABLIM1O14639 778 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 NBNO60934 754 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TIMP1P01033 207 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 HLA-DRAP01903 254 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 IVDP26440 423 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CD52P31358 61 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CYP2C18P33260 490 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 PIK3CAP42336 1068 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 SCTRP47872 440 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 BBOF1Q8ND07 529 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 VCPIP1Q96JH7 1222 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 PRMT1Q99873 361 aaKnown RBP16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 HTATIP2Q9BUP3 242 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TRAIPQ9BWF2 469 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 PPP1R12CQ9BZL4 782 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 KLC4Q9NSK0 619 aa16.79■□□□□ 0.28
CHRFAM7A-203ENST00000401522 A0A0B4J269 797 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TCEA3O75764 348 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TTC4O95801 387 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 C4BPAP04003 597 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 MNAT1P51948 309 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 MCL1Q07820 350 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 NFX1Q12986 1120 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 NOTUMQ6P988 496 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 RHOT1Q8IXI2 618 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 LRRC34Q8IZ02 419 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 GADD45GIP1Q8TAE8 222 aaPredicted RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ELMO3Q96BJ8 720 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CPB2Q96IY4 423 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ZBTB45Q96K62 511 aaPredicted RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 DDX23Q9BUQ8 820 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TRIM7Q9C029 511 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 PDZD7Q9H5P4 517 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 MRPL47Q9HD33 250 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ANAPC5Q9UJX4 755 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 DNAJC8O75937 253 aaPredicted RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ACSL3O95573 720 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CALCAP01258 141 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TNNI1P19237 187 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ACO1P21399 889 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ITGA8P53708 1063 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CCL23P55773 120 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CCNG2Q16589 344 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TDRD10Q5VZ19 366 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 MPZL3Q6UWV2 235 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 EXOC3L1Q86VI1 746 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 KATNAL2Q8IYT4 538 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 IPO4Q8TEX9 1081 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ATG4AQ8WYN0 398 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TCHPQ9BT92 498 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 HAPLN2Q9GZV7 340 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 PRDM5Q9NQX1 630 aaPredicted RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 PIN4Q9Y237 131 aaKnown RBP16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ALPK3Q96L96 1907 aa16.78■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CXCL10P02778 98 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 GSTA1P08263 222 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 VIMP08670 466 aaKnown RBP16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ITGB8P26012 769 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CHKAP35790 457 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ADCY8P40145 1251 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 KLF1Q13351 362 aaPredicted RBP16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CUL2Q13617 745 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 LONRF1Q17RB8 773 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TMEM132AQ24JP5 1023 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 SPRED3Q2MJR0 410 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 PLEKHG4Q58EX7 1191 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 EEF1DP3Q658K8 133 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 CEP128Q6ZU80 1094 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 SCLYQ96I15 445 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 ANKFY1Q9P2R3 1169 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 AGO2Q9UKV8 859 aaKnown RBP16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 NEU2Q9Y3R4 380 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 SCINQ9Y6U3 715 aa16.77■□□□□ 0.28
CHRFAM7A-203ENST00000401522 TANC1Q9C0D5 1861 aa16.77■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RAG1P15918 1043 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 RFC2P35250 354 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 XRCC4Q13426 336 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 LLGL1Q15334 1064 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 SLC27A1Q6PCB7 646 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CDR2LQ86X02 465 aaPredicted RBP16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 PHF13Q86YI8 300 aaPredicted RBP16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CCDC50Q8IVM0 306 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 CCDC89Q8N998 374 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ARHGEF2Q92974 986 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 HERPUD2Q9BSE4 406 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 FOXP3Q9BZS1 431 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 ADAM22Q9P0K1 906 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 THAP12O43422 761 aa16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 LDHAP00338 332 aaKnown RBP16.76■□□□□ 0.27
CHRFAM7A-203ENST00000401522 MCF2P10911 925 aa16.76■□□□□ 0.27
Retrieved 100 of 20,778 RNA–protein pairs in 29.1 ms